Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K18
         (1044 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583...    29   8.1  

>03_02_0137 +
           5832608-5833590,5833680-5833731,5833827-5833904,
           5835228-5835347,5835618-5835716,5835821-5835975,
           5836117-5836257,5836395-5836503
          Length = 578

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 487 RLAKSSWPLPGLSS-EXDCPKKLKFPP 564
           R  + SW LPGL + + DC  K+  PP
Sbjct: 275 RAGEGSWALPGLQAWKEDCEGKIGMPP 301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,006,845
Number of Sequences: 37544
Number of extensions: 393893
Number of successful extensions: 1079
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3082779744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)