Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K17
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 34 0.024
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 34 0.032
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.073
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 31 0.17
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 31 0.17
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.17
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 31 0.29
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.51
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 30 0.51
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 1.2
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 28 1.6
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 28 2.1
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 27 2.7
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 27 2.7
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 2.7
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 27 2.7
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.7
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 27 3.6
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 4.8
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 4.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 4.8
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 4.8
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 26 6.3
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 26 6.3
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 26 6.3
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 6.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 6.3
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 6.3
SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|... 26 8.4
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 26 8.4
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 8.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 8.4
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 8.4
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 26 8.4
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 26 8.4
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 26 8.4
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 450 VATDEEKMLAPEIPEDSEGYFGMKPSPCRWDIPKTIDELN 569
V D K+ +P + + S GY M SP R D+P I +N
Sbjct: 453 VTNDRVKVKSPSLIQSSTGYGSMSQSPSRSDLPSKISRVN 492
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.9 bits (74), Expect = 0.032
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 246 KARILTIQDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEEN 425
+AR L N K + +E S+ EEN+ D+E + I D+ N+L ++ EE+
Sbjct: 3952 EARELESDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEED 4011
Query: 426 -----QKTDEGSTVATDEEKMLAPE 485
QK++E S A +E +++ E
Sbjct: 4012 LLETEQKSNEQS-AANNESDLVSKE 4035
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +3
Query: 267 QDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDE 440
+D+ ++ N+ + D +E+ + E+D + ++ S +EENQ DE
Sbjct: 3929 EDDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLDE 3986
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.073
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +3
Query: 255 ILTIQDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKT 434
I+ ++ + E+ +SSE E+ E K +++ ++ + + + E +S +
Sbjct: 127 IVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEE 186
Query: 435 DEGSTVATDEEKMLAPEIPEDSE 503
+E T+E+K + E DSE
Sbjct: 187 EEEVVEKTEEKKEGSSESSSDSE 209
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/80 (22%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +3
Query: 270 DNTRNKMENQNSS-EKSEDTEENRKTDDE---ADTINTDVQNTLTPEVKSGDKEENQKTD 437
+++ ++ E+++SS E E+ E KT+++ + ++D +++ +SGD + + ++
Sbjct: 169 ESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSE 228
Query: 438 EGSTVATDEEKMLAPEIPED 497
S+ + DE+K A E+
Sbjct: 229 SESS-SEDEKKRKAEPASEE 247
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 288 MENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEE 467
ME + +D EN+K D+ D + NT+ + D+++N + +E V E+
Sbjct: 326 MEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILED----DEKDNDEEEEEEIVNAREK 381
Query: 468 KML 476
+L
Sbjct: 382 NLL 384
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 288 MENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEE 467
ME + +D EN+K D+ D + NT+ + D+++N + +E V E+
Sbjct: 326 MEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILED----DEKDNDEEEEEEIVNAREK 381
Query: 468 KML 476
+L
Sbjct: 382 NLL 384
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 264 IQDNTRNKMENQNSS-EKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDE 440
+ + +K EN +S K + ++ + T+++ TDV+ T +++ DK+E KTD
Sbjct: 420 VGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDE--KTDS 477
Query: 441 GSTVATDEE 467
T EE
Sbjct: 478 KETEDKVEE 486
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 309 EKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGS 446
+K+ EE + DDE+ T T V+ T E D EE D G+
Sbjct: 138 KKNTVKEEEIEKDDESATTETPVKEEPTGEETEADHEEKASVDHGN 183
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.51
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 216 VGGLEYYGGIKARILTIQDNTRNKMEN--QNSSEKSEDTEENRKTDDEADTINTD--VQN 383
VG E + ++ + Q + K E+ ++ EKS+DT N T + + IN D + N
Sbjct: 962 VGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDT-SNDVTTENTNDINGDSNMDN 1020
Query: 384 TLTPEVKSGDKEENQKTDEGSTVATDEEKMLAPEIPEDS 500
T + KS D + +T T EE++ E E S
Sbjct: 1021 VATVD-KSTDAVDTSTATVAATTTTAEEELPQKESQERS 1058
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 29.9 bits (64), Expect = 0.51
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 264 IQDNTRNKMENQNSSEKSE--DTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTD 437
+ + ++ EN +S + + D +E + + +D + + T E + +E + +
Sbjct: 47 LAEEKKSLFENSDSENEKDLIDADEFEEAETLSDLEHDEEPQTFADEFIDDEAKECEGEE 106
Query: 438 EGSTVATDEEKMLAPEIPEDS 500
E S +DEE + P +DS
Sbjct: 107 EDSVFDSDEEHEVKPMFSDDS 127
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 267 QDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGD----KEENQKT 434
+D++ + + S SED++ + D + +++ N+ T SG+ N +
Sbjct: 280 EDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTS 339
Query: 435 DEGSTVATDEE 467
E ST DE+
Sbjct: 340 SEESTSVKDED 350
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/71 (18%), Positives = 32/71 (45%)
Frame = +3
Query: 291 ENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEK 470
E+ +SS +SE + E+ + + ++ + + S E++ + EGS ++
Sbjct: 111 ESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSS 170
Query: 471 MLAPEIPEDSE 503
+ ED++
Sbjct: 171 SESESSSEDND 181
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/70 (20%), Positives = 38/70 (54%)
Frame = +3
Query: 291 ENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEK 470
E+++SSE S+ + + ++ E+ + +D ++ + S + E + + ++ S+ ++D E
Sbjct: 136 ESESSSEDSDSSSSSSDSESESSSEGSDSSSSSS----SSESESSSEDNDSSSSSSDSES 191
Query: 471 MLAPEIPEDS 500
+ E + S
Sbjct: 192 ESSSEDSDSS 201
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/70 (20%), Positives = 38/70 (54%)
Frame = +3
Query: 291 ENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEK 470
E+++SSE S+ + + ++ E+ + +D ++ + S + E + + ++ S+ ++D E
Sbjct: 190 ESESSSEDSDSSSSSSDSESESSSEGSDSSSSSS----SSESESSSEDNDSSSSSSDSES 245
Query: 471 MLAPEIPEDS 500
+ E + S
Sbjct: 246 ESSSEDSDSS 255
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 303 SSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEKMLAP 482
SSE E+ EEN D++ D D++ + E ++ D + + + + + ++ E L+P
Sbjct: 130 SSEDGEEEEENDYIDEDVDEAGYDIE--VVDEAENDDMDNDLEANADAFDESNLEASLSP 187
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +3
Query: 285 KMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDE 464
K+E +NS + E + D+E + I DV L E S + + S T+E
Sbjct: 407 KVETKNSWTAISEETEGLQDDEEYNGIPVDVNELLNVEFISQIPMSTETSSSSSPQPTEE 466
Query: 465 EKMLAPEIPEDSEGYFGMK 521
K A P ++G F K
Sbjct: 467 RK--AKFKPSFTQGTFVSK 483
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/99 (17%), Positives = 39/99 (39%)
Frame = +3
Query: 267 QDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGS 446
+DN+ K + + E + E+ KT+ E + + + P V K ++ + S
Sbjct: 31 KDNSSGKKRSVSEEESQDKYEDEMKTEGEFPSYKHTLVQVVVPGVDHRTKLHSESSKNDS 90
Query: 447 TVATDEEKMLAPEIPEDSEGYFGMKPSPCRWDIPKTIDE 563
+ D + + P++ + P +P +D+
Sbjct: 91 EITPDINR--SKVNPQEYSEFSVASPQTISPSLPLNLDD 127
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 507 YFGMKPSPCRWDIPKTID-ELNGREGKNLARYGITY 611
YFG+ S WDIPK ID ++ L+R G+ Y
Sbjct: 122 YFGVVNSS-EWDIPKWIDMDIAHSNWNRLSREGVLY 156
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +3
Query: 297 QNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEKM 473
Q+ +E E + D A+ + D L + D+EENQ + ++ E M
Sbjct: 257 QDKAEAEEKVSADASVQDIAEKESLDADKELATNDQEDDEEENQAETQKDGAISNNENM 315
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 252 RILTIQDNTRNKMENQNSSEKSEDTEEN--RKTDDEADTINTDVQNTLTPEVKSGDKEEN 425
++ + ++ + E N+ E ++ N KTD +++ + E GD +E
Sbjct: 1113 KVSSSNNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDEKANIKTEMKSETVEGDNKEL 1172
Query: 426 QKTDEGSTVATD 461
++T +G V TD
Sbjct: 1173 RETMKGENVQTD 1184
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 267 QDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGS 446
+++ N EN+ ++ +E+ EE+ + DDE D + D + D+ NQ D +
Sbjct: 94 KEDEDNVEENEEEADANEEEEEDEE-DDEEDEEDEDESGGGRRKRARHDR-RNQFLDIEA 151
Query: 447 TVATDEEKM 473
V DEE++
Sbjct: 152 EVDEDEEEL 160
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 267 QDNTRNKMENQNSSEKSEDTEENRKTDDEADT-INTDVQNTLTPEVKSGDKEEN 425
++ N ++++ +EK TEE KTDD T DV + P + + +++
Sbjct: 477 EEPVANGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTSNGEPSTATSESKDS 530
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +3
Query: 285 KMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDE 464
+ + +++S++S D+ + +D+E+D+ + Q E +++ Q E A ++
Sbjct: 138 RRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQ 197
Query: 465 EK 470
EK
Sbjct: 198 EK 199
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 26.6 bits (56), Expect = 4.8
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 4/163 (2%)
Frame = +3
Query: 264 IQDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEG 443
I D +N + N + E+ K+ +T TDV N TP+ ++ EE+ T+
Sbjct: 381 INDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVINNSTPKEET---EESPSTELP 437
Query: 444 STVATDEEKMLAPEIPEDSEGYFGMKPSPCRWD-IPKTIDELNGREGKNLARYGITYVFE 620
T P +P ++ KPS + P+ N G +R G E
Sbjct: 438 ETGKEQPPNKAEPAVPTEAS---STKPSEAAEESTPRFSVRPNKFTG---SRAGFVAALE 491
Query: 621 DK--KGQLMPGIIGEPEK-PSVNFKFGIQNSSEDNTDEGEIKT 740
+ KG LM + K PS +SE E E T
Sbjct: 492 SRLQKGPLMRSFVPNKSKSPSGTKSPASGETSEAGVKETETTT 534
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 303 SSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTV 452
+ E SED +E+ TD+ + ++V + +P+ + +N +G++V
Sbjct: 353 NDESSEDDDEDNNTDEANEDAQSNVSDE-SPKGEGSSHSDNVVLSDGNSV 401
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 4.8
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 228 EYYGGIKARILTIQDNTRNKMENQNSSEK---SEDTEENRKTD-DEADTINTDVQNTLTP 395
EY G R + + + + ++E Q E+ + E RK + E + ++ ++L
Sbjct: 36 EYLTGFHKRKVERRKHAQVQLEQQKREERLALRKSLREQRKRELAERLAFSKELNSSL-- 93
Query: 396 EVKSGDKEENQKTDEGSTVATDEEKMLAPEIPEDSE 503
D+E +Q+ D S ++EE + P+ E E
Sbjct: 94 ---ENDEESSQQEDSSSKSDSEEESSMEPKTTEYDE 126
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 321 DTEENRKTDDEADTINTDVQNTLTPEV-KSGDKEENQKTDEGSTVATDEEKMLAPEIPED 497
D +K+DD D TD+ +T + V +SG+K+E V T+E+ M++P D
Sbjct: 166 DKASVKKSDDNLDD-KTDLASTSSSVVVESGEKDE-------PVVVTEEKTMVSPPSRPD 217
Query: 498 S 500
S
Sbjct: 218 S 218
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 6.3
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Frame = +3
Query: 288 MENQN-SSEKSEDTE-ENRKTDDEADTINTDVQN--------TLTPEVKSGDKEENQKTD 437
MEN S++ ++ E E+++T A + + +N + PE +G +E + T+
Sbjct: 68 MENDTISTDVNKPAEPESKETSAPAAAVEIEKENESIISKETSQAPETSTGAEEHQETTE 127
Query: 438 EGSTVATDEEKMLAPEIPEDSEGYFGMKPSPCRWDIPKTIDELNGREGKNLARYGI 605
E ++E + +P++ ++ E R+ IP +D+ ++ AR+GI
Sbjct: 128 ESKQSVSNE--VSSPDVAKEQEKLIQRAK---RFGIP--VDDEQIKKAARAARFGI 176
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 IQDNTRNK-MENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQK 431
+ D +N +EN+ E + T K D+E+D DV+ P +K +++ K
Sbjct: 129 VHDYDKNSPIENEKILEDDQHTAMKEK-DNESDKTMKDVEEKTEPSLKKEEEDIQMK 184
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 270 DNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQN 383
D+ ++ NSSE+++DT E T D T+ DV N
Sbjct: 239 DSEEFSEDSDNSSEENKDTNE-PSTKDAEKTVPEDVVN 275
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 279 RNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDE 440
RNK E S+ +DT K E + + + + K+GD E + D+
Sbjct: 1271 RNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEGDAKTGDDNEMEDLDK 1324
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/54 (16%), Positives = 25/54 (46%)
Frame = +3
Query: 264 IQDNTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEEN 425
+++ ++ ++N+N + S + + DDE T+ T + ++ + N
Sbjct: 418 LKNASKQSIQNENKASYSSYEDSEIQNDDETRTVGTPTETISVVRLRRSSSQSN 471
>SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.4
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 288 MENQNSSEKSE-DTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDE 464
M+N +S KS D E+ KTD E D ++ L PE S +EG+ +
Sbjct: 1 MKNNYTSLKSPLDEEDELKTDHEID-----LEKGLLPEYNS--------EEEGALPPYSD 47
Query: 465 EKMLAPEIPEDS 500
LA +PEDS
Sbjct: 48 ISKLANPVPEDS 59
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 291 ENQNSSEKSEDTEENRKTDDEADTINTDVQN--TLTPEVKSGDKEENQKTDEGSTVATDE 464
E SSE +T + D+E D + + N TP+ + EN T ST + +
Sbjct: 677 ETSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTPD----EDTENNNTSSISTKSIMD 732
Query: 465 EKMLAPE 485
+ PE
Sbjct: 733 RPLTEPE 739
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 587 VLTFPPIKLVDGFRNVPSTRRGF--HSKISFRIFRYFWC*HFFFIR 456
VL+ P I + N S F S ++F +FR+ C + FIR
Sbjct: 809 VLSIPKINGISISNNETSAYLSFLLWSVVAFSVFRFIGCIFYLFIR 854
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +3
Query: 321 DTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEKMLAPEIPEDS 500
+T R DD + TD+ N + P +K+E + A+D+ K E E +
Sbjct: 298 ETSALRMNDDSLSSNLTDLNNLVLPSNVVNNKKELTEFANEEAEASDKRKEGFTEKEETA 357
Query: 501 EGYFGMKPS 527
+ + PS
Sbjct: 358 DAVVTLVPS 366
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 ENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPE-VKSGDKEENQKTDEGSTVATDEE 467
++ N E D EE+ + D+E + + TPE V + K K G A+ +
Sbjct: 60 DDTNYEEDIIDDEESAQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGG--ASKRK 117
Query: 468 KMLAPEIPEDSEGYFG 515
+ EDSE G
Sbjct: 118 ASRRTVVDEDSENLEG 133
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 25.8 bits (54), Expect = 8.4
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 288 MENQNSSEKSE-DTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDE 464
M+N +S KS D E+ KTD E D ++ L PE S +EG+ +
Sbjct: 1 MKNNYTSLKSPLDEEDELKTDHEID-----LEKGLLPEYNS--------EEEGTLPLYSD 47
Query: 465 EKMLAPEIPEDS 500
LA +PEDS
Sbjct: 48 ISKLANPVPEDS 59
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 451 TVEPSSVFWFSSLSPDLTSGVKVFCTSVL 365
++ PS+ FW S L+P V +C S L
Sbjct: 281 SILPSAGFWQSFLAPKFFDAVLAYCLSQL 309
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 411 DKEENQKTDEGSTVATDEEKMLAPEIPEDSE 503
D EEN++ D G +A +EE+ E E+ E
Sbjct: 326 DLEENEEDDLGDFIAEEEEEEEQEEEQEEDE 356
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,372,542
Number of Sequences: 5004
Number of extensions: 68736
Number of successful extensions: 302
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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