Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K17
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    29   0.043
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.94 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   2.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   2.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   5.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 0.043
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 276 TRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTD 437
           T    + QN+ E   D  E  +T DE DTI   +  +L+   KS   +E  +TD
Sbjct: 154 TMKSKKEQNAEEDIVDPVEENETYDEFDTIRIPIVRSLS---KSPPNDEGIETD 204


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +3

Query: 273 NTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKS 407
           N+R++   QNS +   +  + R+T  E     T+ + +  P++ S
Sbjct: 38  NSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIIS 82


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
 Frame = +3

Query: 312 KSEDTEENRKTDDEADTINTDVQNTLTPEVKSGDKEENQKTDEGSTVATDEEKMLAPEIP 491
           K E+   NRK  D  D     ++NT        D E+ +       V   E +++  +I 
Sbjct: 163 KEEEQTINRKNSDYLDNQEVSMENTENKSCTDSDIEKYKMFCNLENVKLKELRIILEDIK 222

Query: 492 EDSEGY---FGMKPSPCRWDIPKTIDELNGREGKNLARYGITYVFEDKK 629
             +  +    GMK      DI +    L  +E K +  Y I +   D K
Sbjct: 223 HINTRHNTKNGMKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLK 271


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 774 GVFRQT*NRAVSSLFHLHQYCLLMNFE 694
           GVF+   ++AVS L+ LH+    MN+E
Sbjct: 486 GVFKLVDSKAVSRLWGLHKNKPDMNYE 512


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +3

Query: 273 NTRNKMENQNSSEKSEDTEENRKTDDEADTINTDVQNTLTPEVKS 407
           N+R++   QNS +   +  + R+T  E      + + +  P++ S
Sbjct: 38  NSRSREREQNSYKNEREYRKYRETSKERSRDRAERERSREPKIIS 82


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +3

Query: 546  PKTIDELNGREGKNLARYGITYVFEDKKGQLMPGIIGEPEKPSVNFKFGIQNSSEDN 716
            PKT++E+   +   L  +    +  D+ GQL   +  E  +  +  + GI +S  D+
Sbjct: 1017 PKTLNEVLQADMNALKNFNQPLLVNDQLGQLYLDLEVEGFETKLVLEDGITSSGSDS 1073


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 179 IKPFKNINNIYYRGRSRIL-RRNKSKNIDD 265
           +K     NN++Y+G+  IL  +  +K I D
Sbjct: 282 VKSQYQANNVHYQGKENILWTQASAKGISD 311


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 255 ILTIQDNT-RNKMENQNSSEKSEDTEENRKTDDEAD 359
           +LT Q +   NK +++N+   ++DTE+  + + E+D
Sbjct: 48  LLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESD 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,913
Number of Sequences: 438
Number of extensions: 4548
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)