Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K15
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0069 - 11880841-11880936,11881150-11881221,11881263-118813...   116   3e-26
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235...    30   2.7  
01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955     28   8.1  

>08_02_0069 -
           11880841-11880936,11881150-11881221,11881263-11881343,
           11881471-11881542,11882549-11882770,11882849-11882941,
           11883509-11883601,11884546-11884632,11884958-11884990,
           11885091-11885185,11886590-11886674,11886778-11886864,
           11887757-11887846,11887929-11888057,11888668-11888757,
           11888849-11888908,11889074-11889311,11889852-11890054
          Length = 641

 Score =  116 bits (278), Expect = 3e-26
 Identities = 52/119 (43%), Positives = 78/119 (65%)
 Frame = +3

Query: 222 QKRITLWDXYKAQYTEQIASKPDISVVVTLPDGKTVEAKAWKTTPYDVAKGISQGLADAX 401
           QKRI  ++  +A+   +  +     + +TLPDG   + K W +TP D+AK IS GLA++ 
Sbjct: 42  QKRIRQFEEIQAKQALERLNIGGEPIRITLPDGAVKDGKKWISTPMDIAKEISSGLANSC 101

Query: 402 XXARVXNELWDLDRPLKGDCKLELLRWDNTDPQAVFWHSSAHMLGKXMERVYGGCLCYG 578
             A+V   LWD+ RPL+GDC+L+L ++D+ + +  FWHSSAH+LG+ +ER YG  LC G
Sbjct: 102 LIAQVNGTLWDMTRPLEGDCELKLFKFDSNEGRDTFWHSSAHILGESLERAYGCKLCIG 160


>01_07_0126 -
           41222916-41222942,41223120-41223190,41223478-41223560,
           41223587-41223653,41223740-41223848,41224431-41224511,
           41224671-41224940,41225035-41226510,41226832-41226908,
           41227812-41227912,41229397-41229660,41230964-41231136
          Length = 932

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/79 (21%), Positives = 37/79 (46%)
 Frame = +3

Query: 267 EQIASKPDISVVVTLPDGKTVEAKAWKTTPYDVAKGISQGLADAXXXARVXNELWDLDRP 446
           +++  + DI     +   +T  AK+  T   D+A+ +++    +    +  N  W +D P
Sbjct: 242 DRLLVEDDIETYQQISIDQTTRAKSASTLGSDIAQCLAKRARCSSPLKKAGNFDW-VDTP 300

Query: 447 LKGDCKLELLRWDNTDPQA 503
              DC+  ++  +NT  +A
Sbjct: 301 TVDDCRTSIISMENTVDRA 319


>01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955
          Length = 406

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 39  DLICHCQNRTRYTIAMGDTAAEDIKNLN 122
           DL+C C   TR+ ++M  + AE +++ N
Sbjct: 359 DLVCRCTKNTRHLVSMLRSLAERLEDAN 386


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,189,401
Number of Sequences: 37544
Number of extensions: 277232
Number of successful extensions: 607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)