Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K15
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69902-6|CAD89723.1|  684|Caenorhabditis elegans Hypothetical pr...   169   3e-42
Z69902-5|CAA93762.1|  725|Caenorhabditis elegans Hypothetical pr...   169   3e-42
Z70270-1|CAB61007.1|  407|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AF029887-1|AAC48376.1|  407|Caenorhabditis elegans UNC-129 protein.    28   9.5  

>Z69902-6|CAD89723.1|  684|Caenorhabditis elegans Hypothetical
           protein C47D12.6b protein.
          Length = 684

 Score =  169 bits (410), Expect = 3e-42
 Identities = 72/135 (53%), Positives = 100/135 (74%)
 Frame = +3

Query: 180 SNAVSEMNPWPEYIQKRITLWDXYKAQYTEQIASKPDISVVVTLPDGKTVEAKAWKTTPY 359
           S A ++M PWP +I++RI LWD  KA+Y  +IA+K    + +TLPDGK  E K W+TTP+
Sbjct: 2   SKAPTDMAPWPAFIEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPF 61

Query: 360 DVAKGISQGLADAXXXARVXNELWDLDRPLKGDCKLELLRWDNTDPQAVFWHSSAHMLGK 539
           ++A+ IS+GLA+A   A+V   +WDLDRP +G+ KLELL++D+ + + VFWHSSAH+LG+
Sbjct: 62  EIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGE 121

Query: 540 XMERVYGGCLCYGRP 584
            MER  GG LCYG P
Sbjct: 122 AMERYCGGHLCYGPP 136


>Z69902-5|CAA93762.1|  725|Caenorhabditis elegans Hypothetical
           protein C47D12.6a protein.
          Length = 725

 Score =  169 bits (410), Expect = 3e-42
 Identities = 72/135 (53%), Positives = 100/135 (74%)
 Frame = +3

Query: 180 SNAVSEMNPWPEYIQKRITLWDXYKAQYTEQIASKPDISVVVTLPDGKTVEAKAWKTTPY 359
           S A ++M PWP +I++RI LWD  KA+Y  +IA+K    + +TLPDGK  E K W+TTP+
Sbjct: 43  SKAPTDMAPWPAFIEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPF 102

Query: 360 DVAKGISQGLADAXXXARVXNELWDLDRPLKGDCKLELLRWDNTDPQAVFWHSSAHMLGK 539
           ++A+ IS+GLA+A   A+V   +WDLDRP +G+ KLELL++D+ + + VFWHSSAH+LG+
Sbjct: 103 EIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGE 162

Query: 540 XMERVYGGCLCYGRP 584
            MER  GG LCYG P
Sbjct: 163 AMERYCGGHLCYGPP 177


>Z70270-1|CAB61007.1|  407|Caenorhabditis elegans Hypothetical
           protein C53D6.2 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 468 ELLRWDNTDPQAVFWHSSAHMLGKXMERVY 557
           +LL + ++DP    +H S+H L + M+ +Y
Sbjct: 32  DLLHFKSSDPNVTSFHRSSHTLTEHMKNLY 61


>AF029887-1|AAC48376.1|  407|Caenorhabditis elegans UNC-129 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 468 ELLRWDNTDPQAVFWHSSAHMLGKXMERVY 557
           +LL + ++DP    +H S+H L + M+ +Y
Sbjct: 32  DLLHFKSSDPNVTSFHRSSHTLTEHMKNLY 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,405,694
Number of Sequences: 27780
Number of extensions: 239192
Number of successful extensions: 468
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)