Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K10
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    32   0.47 
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    32   0.62 
Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 24/70 (34%), Positives = 29/70 (41%)
 Frame = -2

Query: 806 TSQTPPGSAPGYM*IGSCCNARLSKRS*GTAGGCSARAISQSRASGGXYGCGFSRALVAS 627
           +S +   S+ GY   G    A     S  +AGG S  + S   AS G Y  G S    A 
Sbjct: 400 SSSSSSSSSGGYSSGGGDAGASSGGES-SSAGGYSGSSSSGGEASSGGYSGGSSEPAPAP 458

Query: 626 LPPPAVSGAY 597
              PA SG Y
Sbjct: 459 EAAPASSGGY 468


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 24/70 (34%), Positives = 29/70 (41%)
 Frame = -2

Query: 806 TSQTPPGSAPGYM*IGSCCNARLSKRS*GTAGGCSARAISQSRASGGXYGCGFSRALVAS 627
           +S +   S+ GY   G    A     S  +AGG S  + S   AS G Y  G S    A 
Sbjct: 400 SSSSSSSSSGGYSSGGGDAGASSGGES-SSAGGYSGSSSSGGEASSGGYSGGSSEPAPAP 458

Query: 626 LPPPAVSGAY 597
              PA SG Y
Sbjct: 459 EAAPASSGGY 468


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 203  PLPTGRTSRFTSPQGITRCLYT*TAVSNTSFPTVP 307
            P+P  R+S+ TSP   +R + T T VS TS P  P
Sbjct: 1615 PVPPWRSSKSTSPAIASRLINTTTTVSGTSSPPPP 1649


>Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical
           protein F53C11.1 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 187 SSPQRTASDGTHVPLH*PPGXYSVPLHVDCSIEYELPD 300
           +SP  +     H PL+   G    P + DCS+E+E+PD
Sbjct: 24  NSPITSNVPSGHFPLN---GLAKFPANYDCSVEFEIPD 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,403,875
Number of Sequences: 27780
Number of extensions: 226274
Number of successful extensions: 478
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)