Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K09
         (1060 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     75   4e-15

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 74.9 bits (176), Expect = 4e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +1

Query: 178 VKLPDTIENVKATIQDKEGIPPDQQRLIFAGKQLEDGRXLS 300
           V+  DTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGR LS
Sbjct: 17  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57



 Score = 74.9 bits (176), Expect = 4e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +1

Query: 178 VKLPDTIENVKATIQDKEGIPPDQQRLIFAGKQLEDGRXLS 300
           V+  DTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGR LS
Sbjct: 93  VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133



 Score = 74.9 bits (176), Expect = 4e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +1

Query: 178 VKLPDTIENVKATIQDKEGIPPDQQRLIFAGKQLEDGRXLS 300
           V+  DTIENVKA IQDKEGIPPDQQRLIFAGKQLEDGR LS
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209



 Score = 43.6 bits (98), Expect = 1e-05
 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +2

Query: 146 TLTGKTITLEV*SFQTLSKM-SKLQSKTRKVFLQTNNVSSLPGNN*KMAALFQDYXIXXE 322
           TLTGKTITLEV    T+  + +K+Q K      Q   + +  G   +      DY I  E
Sbjct: 7   TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA--GKQLEDGRTLSDYNIQKE 64

Query: 323 SXLHLVLRLXGG 358
           S LHLVLRL GG
Sbjct: 65  STLHLVLRLRGG 76



 Score = 43.6 bits (98), Expect = 1e-05
 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +2

Query: 146 TLTGKTITLEV*SFQTLSKM-SKLQSKTRKVFLQTNNVSSLPGNN*KMAALFQDYXIXXE 322
           TLTGKTITLEV    T+  + +K+Q K      Q   + +  G   +      DY I  E
Sbjct: 83  TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA--GKQLEDGRTLSDYNIQKE 140

Query: 323 SXLHLVLRLXGG 358
           S LHLVLRL GG
Sbjct: 141 STLHLVLRLRGG 152



 Score = 43.6 bits (98), Expect = 1e-05
 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +2

Query: 146 TLTGKTITLEV*SFQTLSKM-SKLQSKTRKVFLQTNNVSSLPGNN*KMAALFQDYXIXXE 322
           TLTGKTITLEV    T+  + +K+Q K      Q   + +  G   +      DY I  E
Sbjct: 159 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA--GKQLEDGRTLSDYNIQKE 216

Query: 323 SXLHLVLRLXGG 358
           S LHLVLRL GG
Sbjct: 217 STLHLVLRLRGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,877
Number of Sequences: 2352
Number of extensions: 11145
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 117985413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)