Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K08
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703...    40   0.003

>07_03_1397 +
           26269186-26269525,26269727-26269932,26270225-26270327,
           26270570-26270577
          Length = 218

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +2

Query: 506 KILDTAGTEQFASMRDLYIK-XVXALXXYILNXPQTFXDINX*RN*LLVSKDQXVXXSTC 682
           +I DTAG E+F ++   Y +  V AL  Y ++  QTF  +    N L    D  V     
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILV 125

Query: 683 GKKG*LXXQXXVAHAEGXALXQ 748
           G K  L     V+ AEG AL +
Sbjct: 126 GNKTDLKHAREVSTAEGKALAE 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,761,340
Number of Sequences: 37544
Number of extensions: 290925
Number of successful extensions: 454
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)