Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K07
(1008 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 51 2e-07
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 41 2e-04
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.036
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.084
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.26
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.34
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.45
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 5.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 9.7
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.7
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 9.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 51.2 bits (117), Expect = 2e-07
Identities = 47/166 (28%), Positives = 48/166 (28%)
Frame = +1
Query: 301 PPPPPPXXXXXXGXXXXPPRXGGGXXRXKKGXXPPGXXPXGGGGXPPPXXXHXXGGXXPP 480
PPPPPP G PP+ R PP P G PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQG-----RSAPPPPPPRSAP-STGRQPPPLSSSRAVSNPPA 390
Query: 481 PPXAXXKXPXXXXPXAPXXFXXXPXPGXRXXPXPPXXAXXPPPXXXXXXGGGXXXXXXXX 660
PP A P P P P PP PP
Sbjct: 391 PPPAI---PGRSAPALPP-LGNASRTSTPPVPTPPSLPPSAPPSLPP--SAPPSLPMGAP 444
Query: 661 XXPPAPPXXPXXXPPPXGXPAXGXXRXRXXXXPPXRXPAGPXAPPA 798
PP PP P P P G PA PP PA P AP A
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA-PAAPVA 489
Score = 43.6 bits (98), Expect = 5e-05
Identities = 52/215 (24%), Positives = 57/215 (26%), Gaps = 6/215 (2%)
Frame = +2
Query: 212 SPXXGPXSRXVGPPXXXXXPPPRXKXXKXTPPPPRPXXXXXXGXXXPXPGXGXAXGGXRR 391
+P S+ PP K PPPP P G P G G +
Sbjct: 281 NPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK--PPIGNGSSNSSLPP 338
Query: 392 XPXPXGXAPXGGGGXPPPXXXTXXGGXXPPPXWXXPXXXXXXXRXPPXXFXX---ARXPG 562
P P G PP G PPP P R PP + P
Sbjct: 339 PPPPPRSNAAGSIPLPPQ------GRSAPPPP--PPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 563 PGXXXPPXXXPXXPPPXXXXXRGGXXXXXXXXXAXXPPPPXXRXXPPPPXAXPRXGXAAR 742
P P P PP PP P P + P AA
Sbjct: 391 PPPAIPGRSAPALPP---LGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 743 AXAXXXRXAXPXXR---PPPPXPPXAPXXPPAXPP 838
A P PP PP AP PPA P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 41.5 bits (93), Expect = 2e-04
Identities = 54/249 (21%), Positives = 57/249 (22%), Gaps = 18/249 (7%)
Frame = +1
Query: 202 PPXLPXXXXXXXXXXXXXXXXXP-PPPXKXXXXNPPPPPPXXXXXXGXXXX--------- 351
PP +P P PPP +PP PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 352 -PP--RXGGGXXRXKKGXXPPGXXPXGGGGXPPPXXXHXXGGXXPPPPXAXXKXPXXXXP 522
PP R K PP P PP PPPP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 523 XAPXXFXXXPXPGXRXXPXPPXXAXXPPPXXXXXXGGGXXXXXXXXXXPPAPPXXPXXXP 702
P P P R P PPP AP P
Sbjct: 353 LPPQGRSAPPPPPPRSAPST---GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNA 409
Query: 703 -----PPXGXPAXGXXRXRXXXXPPXRXPAGPXAPPAXPXXXPXAXXXXPXAXXXXAPPP 867
PP P PP P+ P PA P P A P A PP
Sbjct: 410 SRTSTPPVPTPP-SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 868 XXXRRXXPP 894
PP
Sbjct: 469 LPPAAPAPP 477
Score = 37.1 bits (82), Expect = 0.004
Identities = 56/209 (26%), Positives = 59/209 (28%)
Frame = +2
Query: 203 PPXSPXXGPXSRXVGPPXXXXXPPPRXKXXKXTPPPPRPXXXXXXGXXXPXPGXGXAXGG 382
PP P P R G P P PPPP P G P P G +
Sbjct: 311 PPPPPP--PSRRNRGKP-----PIGNGSSNSSLPPPPPPPRSNAAGSI-PLPPQGRSAP- 361
Query: 383 XRRXPXPXGXAPXGGGGXPPPXXXTXXGGXXPPPXWXXPXXXXXXXRXPPXXFXXARXPG 562
P P AP G PPP + P P P PP +R
Sbjct: 362 ---PPPPPRSAP-STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL--PPLG-NASRTST 414
Query: 563 PGXXXPPXXXPXXPPPXXXXXRGGXXXXXXXXXAXXPPPPXXRXXPPPPXAXPRXGXAAR 742
P PP P PP A P PP PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPP---SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA------ 465
Query: 743 AXAXXXRXAXPXXRPPPPXPPXAPXXPPA 829
A A P PPP P AP P A
Sbjct: 466 --APPLPPAAPA---PPPAPAPAPAAPVA 489
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/82 (35%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = -3
Query: 445 GGGXPPPPXGGXPXGGGXPSXSSXXXPXXGXGXXPXPXXXXXGA-GGGGGXFXXFXPGGG 269
G G PPP GG GG G G P G GGG G F GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF-----GGG 250
Query: 268 XXXXGGGPHXPTXGTXXXGGRG 203
GGGP G GG G
Sbjct: 251 LGGFGGGPGGFGGGPGGHGGPG 272
Score = 33.9 bits (74), Expect = 0.036
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Frame = -3
Query: 484 GGGGXPPPPXXXXGG----GXPPPPXGGXPXGGGXPSXSSXXXPXXGXGXXPXPXXXXXG 317
GG G PPP GG G GG GG P G P G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG-----------GFEGGPGGFGGG 243
Query: 316 AGGGGGXFXXFXPGGGXXXXGGGP 245
GG GG F GGG GGGP
Sbjct: 244 PGGFGGGLGGF--GGGPGGFGGGP 265
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 490 PXGGGGXPPPPXXXXGG-GXPPPPXGGXPXGGGXP 389
P G GG P GG G P GG P G G P
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.1 bits (92), Expect = 2e-04
Identities = 54/222 (24%), Positives = 57/222 (25%), Gaps = 9/222 (4%)
Frame = +2
Query: 200 HPPXSPXXGPXSRXVGPPXXXXXPPPRXKXXKXTPPPPRPXXXXXXGXXXPXPGXGXAXG 379
HPP +P P S P PP K PP P P P P
Sbjct: 990 HPPSAPLSKPVS--TSPAAPLARVPPVPKLSSKAPPVPLP---SADAPPIPVPSTAPPVP 1044
Query: 380 GXRRXPXPXGXAPXGGGGXPPPXXXTXXGGXXPPPXWXXPXXXXXXXRXP-PXXFXXARX 556
P P + G PPP P P P P P
Sbjct: 1045 IPTSTP-PVPKSSSGAPSAPPP---------VPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 557 PGPGXXXPPXXXPXXPPPXXXXXRGGXXXXXXXXXAXXPPPPXXRXXPPPP----XAXPR 724
P P PP P P G A PP P PP P A P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA--PPVPVPSGAPPVPKPSVAAPPV 1152
Query: 725 XGXAARAXAXXXRXAXPXXRPP----PPXPPXAPXXPPAXPP 838
+ A P P PP P A PP PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 33.5 bits (73), Expect = 0.048
Identities = 31/126 (24%), Positives = 33/126 (26%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGXXX 377
P P+P P G PP P P P P AP P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPV---PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 378 EEXEGXPPPXGXPPXGGGGXPPPXXXXGGGGXPPPPXGXXQXXXXXXAGGPXXXXXXPAX 557
P G PP PP G P PP AG P P
Sbjct: 1179 PPVP--KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP--PVPVPTA 1234
Query: 558 RXPGXP 575
+ P P
Sbjct: 1235 KAPPVP 1240
Score = 29.5 bits (63), Expect = 0.78
Identities = 25/102 (24%), Positives = 26/102 (25%), Gaps = 1/102 (0%)
Frame = +3
Query: 675 PPPXPXXXPPPXRPPRXRXXPXAXXXXXXXPPARXXXRPPRXPXXXPXRXXXXPXGXAXX 854
P P P PP P P P + P P P P A
Sbjct: 1023 PVPLPSADAPPIPVPSTA--PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 855 RXPPAPXPXXXPPXXXXXXAAXXXXXXXXXXXXXP-PXXXPP 977
PP P P PP AA P P PP
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 28.7 bits (61), Expect = 1.4
Identities = 47/232 (20%), Positives = 49/232 (21%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGXXX 377
P P +P P P PP K P P P P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP---------VPAP-----S 1070
Query: 378 EEXEGXPPPXGXPPXGGGGXPPPXXXXGGGGXPPPPXGXXQXXXXXXAGGPXXXXXXPAX 557
E P P G PP PP P P +G P A
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Query: 558 RXPGXPXXXXXXXXXXXXXAXXXGGGXXXXXXXXXXAXRPPPXPXXXPPPXRPPRXRXXP 737
P A P P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 738 XAXXXXXXXPPARXXXRPPRXPXXXPXRXXXXPXGXAXXRXPPAPXPXXXPP 893
P PP P P P A PP P P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPP---PSTAPPVPTPSAG--LPPVPVPTAKAP 1237
Score = 26.6 bits (56), Expect = 5.5
Identities = 42/204 (20%), Positives = 43/204 (21%), Gaps = 6/204 (2%)
Frame = +1
Query: 274 PPXKXXXXNPPPP-----PPXXXXXXGXXXXPPRXGGGXXRXKKGXXPPGXXPXGG-GGX 435
PP PP P PP G PP P G P G
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 436 PPPXXXHXXGGXXPPPPXAXXKXPXXXXPXAPXXFXXXPXPGXRXXPXPPXXAXXPPPXX 615
PP P P A P AP P P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP------APSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 616 XXXXGGGXXXXXXXXXXPPAPPXXPXXXPPPXGXPAXGXXRXRXXXXPPXRXPAGPXAPP 795
PAP P P P P P PP
Sbjct: 1146 SVAA-----------PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 796 AXPXXXPXAXXXXPXAXXXXAPPP 867
+ P P PP
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPP 1218
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/118 (27%), Positives = 34/118 (28%), Gaps = 4/118 (3%)
Frame = +1
Query: 268 PPPPXKXXXXNPPPPPPXXXXXXGXXXXPPRXGGGXXRXKKGXXPPGXXPXGGGGXPPPX 447
PPPP PPPP PP + PP G PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPM----HHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 448 XXHXXGGXXPPPPXAXXKXPXXXXPXAPXXFXXXPXPGXRXXPXP----PXXAXXPPP 609
H G PPPP P P P PG P P P PPP
Sbjct: 264 MHHEPGEHMPPPP--MHHEPGEHMPPPPMHH----EPGEHMPPPPMHHEPGEHMPPPP 315
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/118 (27%), Positives = 34/118 (28%), Gaps = 4/118 (3%)
Frame = +1
Query: 268 PPPPXKXXXXNPPPPPPXXXXXXGXXXXPPRXGGGXXRXKKGXXPPGXXPXGGGGXPPPX 447
PPPP PPPP PP + PP G PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH----HEPGEHMPPPPMHHEPGEHMPPPP 276
Query: 448 XXHXXGGXXPPPPXAXXKXPXXXXPXAPXXFXXXPXPGXRXXPXP----PXXAXXPPP 609
H G PPPP P P P PG P P P PPP
Sbjct: 277 MHHEPGEHMPPPP--MHHEPGEHMPPPPMHH----EPGEHMPPPPMHHEPGEHMPPPP 328
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 268 PPPPXKXXXXNPPPPPPXXXXXXGXXXXPPRXGGGXXRXKKGXXPPGXXPXGGGGXPPPX 447
PPPP PPPP PP + PP G PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH----HEPGEHMPPPPMHHEPGEHMPPPP 328
Query: 448 XXHXXGGXXPPPP 486
H G PPPP
Sbjct: 329 MHHEPGEHMPPPP 341
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Frame = +1
Query: 424 GGGXPPPXXXHXXGGXXPPPPXAXXKXPXXXXPXAPXXFXXXPXPGXRXXPXP----PXX 591
G PPP H G PPPP P P P PG P P P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPP--MHHEPGEHMPPPPMHH----EPGEHMPPPPMHHEPGE 257
Query: 592 AXXPPP 609
PPP
Sbjct: 258 HMPPPP 263
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 378 EEXEGXPPPXGXPPXGGGGXPPPXXXXGGGGXPPPP 485
E E PPP G PPP G PPPP
Sbjct: 202 EPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 27.1 bits (57), Expect = 4.2
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +3
Query: 204 PRPPXXXVPXVGXWGPP----PXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGX 371
P PP P PP P PPP PP P G P P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHH 345
Query: 372 XXEEXEG 392
EE EG
Sbjct: 346 ELEEHEG 352
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 387 EGXPPPXGXPPXGGGGXPPPXXXXGGGGXPPPP 485
E PPP G PPP G PPPP
Sbjct: 218 EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAP 320
P P P P +G GPPP PPPG PPPPP P
Sbjct: 746 PAPIPVPPPAPIMG--GPPPPP--PPPGVAGAGPPPPPPPP 782
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = +3
Query: 300 PPPPPAPXXXLXGXGXXPXPXXGXXXEEXEGXPPPXGXPPXGGGGXPPPXXXXGGGGXPP 479
PPPPPA P P G PPP PP G PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIM----GGPPPPPPPPGVAGAGPPPP-------PPP 781
Query: 480 PP 485
PP
Sbjct: 782 PP 783
Score = 34.7 bits (76), Expect = 0.021
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXP 359
P P PP VP P PPP PPPPP P + G G P P
Sbjct: 732 PPPPPPAVIVPTPA----PAPIPVPPPAPIMGGPPPPPPPP--GVAGAGPPPPP 779
Score = 33.1 bits (72), Expect = 0.064
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 302 PPPPRPXXXXXXGXXXPXPGXGXAXGGXRRXPXPXGXAPXGGGGXPPPXXXTXXGG 469
PPPP P P GG P P G A G PPP GG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 32.7 bits (71), Expect = 0.084
Identities = 22/62 (35%), Positives = 23/62 (37%)
Frame = +3
Query: 249 PPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGXXXEEXEGXPPPXGXPPXGG 428
PPP P P P PPPAP + G P P G G PPP PP
Sbjct: 735 PPPAVIVPTPAPAPI--PVPPPAP---IMGGPPPPPPPPGVAGA---GPPPPPPPPPAVS 786
Query: 429 GG 434
G
Sbjct: 787 AG 788
Score = 32.3 bits (70), Expect = 0.11
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 490 PXGGGGXPPPPXXXXGGGXPPPPXGGXP 407
P GG PPPP G PPPP P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 271 PPPXKXXXXNPPPPPPXXXXXXGXXXXPP 357
PPP PPPPPP G PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.59
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 466 PPPXXXXGGGXPPPPXGGXPXGGGXP 389
PPP GG PPPP G G P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Frame = +2
Query: 698 PPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXA-----PXXPPAXPP 838
PPPP A A A PPPP PP P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 403 PGXXPXGGGGXPPPXXXHXXGGXXPPPP 486
P P GG PPP G PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +2
Query: 212 SPXXGPXSRXVGPPXXXXXP-PPRXKXXKXTPPPPRPXXXXXXGXXXPXPGXGXAXGGXR 388
SP P + V P P PP PPPP P G P P G
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 389 RXPXP 403
R P
Sbjct: 791 RYYAP 795
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 469 PPPPXXXXGGGXPPPPXGGXPXGGGXP 389
P PP GG PPPP G G P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 671 PPPPXXRXXPPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXAPXXPPAXPP 838
PPPP P P P P PPPP A PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAP-----IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 400 PPGXXPXGGGGXPPPXXXHXXGGXXPPPP 486
PP GG PPP G PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 469 PPPPXXXXGGGXPPPPXGGXPXGGG 395
PPPP G PPPP GG
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 438 PPPXXXXGGGGXPPPPXG 491
PPP GG PPPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPG 769
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Frame = +1
Query: 667 PPAPPXXPXXXPPPXGXPAXGXXRXRXXXXPPXRXP----AGPXAPPAXP 804
PP PP P P P PP P AGP PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 674 PPPXXRXXPPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXA 811
P P P PP A G A P PPPP PP A
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPPA 784
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 268 PPPPXKXXXXNPPPPPPXXXXXXGXXXXPP 357
PPP PPPPPP G P
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = -1
Query: 483 GGGXXPPXXVXXXGGGXPPPPX---GAXPXGXGSLLXPPXAXPXP 358
GG PP G G PPPP G P A P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -2
Query: 479 GGXXPPXXXXXXGGGSPPPPXGXXP 405
GG PP G PPPP P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.036
Identities = 23/56 (41%), Positives = 23/56 (41%)
Frame = -1
Query: 840 RGGXAGGXXGAXGGXGGGGRXXGXAXRXXXAXARAAXPXRGXAXGGGGXXRXXGGG 673
RGG GG G GG GGG G A AR RG A GG G GG
Sbjct: 15 RGGR-GGFNGGRGGFGGG---RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -3
Query: 814 GXXXGXRGGRXXXRAGGXXXXXXXAXGXXRXRGGRXGGGXXXGXGGGR 671
G G GGR R GG G RGGR GG G GG +
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR--GGSSGGRGGAK 68
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.084
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 249 PPPXXKXPPPGXKXXKXPPPPPAP 320
PPP PPPG + PPPPP P
Sbjct: 9 PPPPP--PPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +2
Query: 773 PXXRPPPPXPPXA---PXXPPAXPP 838
P PPPP PP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 490 PXGGGGXPPPPXXXXGGGXPPPP 422
P G PPPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.26
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 11/79 (13%)
Frame = +2
Query: 662 AXXPPPPXXRXXPP----PPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXP-------PX 808
A PP P PP P + P A+ P PPP P P
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 809 APXXPPAXPPRXXXXXXPP 865
AP P A PP PP
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 29.9 bits (64), Expect = 0.59
Identities = 21/93 (22%), Positives = 24/93 (25%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGXXX 377
PT PP +P PP PP PPP P + P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPP---IPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 378 EEXEGXPPPXGXPPXGGGGXPPPXXXXGGGGXP 476
+ PPP P P G P
Sbjct: 197 MPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 203 PPXSPXXGPXSRXVGPPXXXXXPPPRXKXXKXTPPPPRP 319
PP SP P PP PPP PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 224 GPXSRXVGPPXXXXXPPPRXKXXKXTPPPPRP 319
G S PP P P+ + T PPRP
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRP 147
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.34
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 773 PXXRPPPPXPPXAPXXPPAXPP 838
P PPPP P P PP+ PP
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPP 1732
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 204 PRPPXXXVPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXP 359
P P P PP P P PPPP AP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 674 PPPXXRXXPPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXP-PXAPXXP 823
PPP PPPP A P A P PPPP P AP P
Sbjct: 1707 PPPPPMSVPPPPSAPP-------------MPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +3
Query: 198 PTPRPPXXXVPXVGX-WGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXG 368
P RP P + PPP PPP PP AP L P G
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 27.1 bits (57), Expect = 4.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 785 PPPPXPPXAPXXPPAXPP 838
P PP PP + PP+ PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPP 1722
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.45
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -1
Query: 867 RGGXXXXXXRGGXAGGXXGAXGGXGGGGR-XXGXAXRXXXAXARAAXPXRGXAXGGGGXX 691
R G RGG GG G+ GG GG R G R G G G
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGF 190
Query: 690 R 688
R
Sbjct: 191 R 191
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/87 (22%), Positives = 22/87 (25%)
Frame = +3
Query: 225 VPXVGXWGPPPXXKXPPPGXKXXKXPPPPPAPXXXLXGXGXXPXPXXGXXXEEXEGXPPP 404
+P G P PP PPPP + G P P PP
Sbjct: 291 IPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSS--TGTSSSPLPSTSTSCTTSTSIPPT 348
Query: 405 XGXPPXGGGGXPPPXXXXGGGGXPPPP 485
PP PPPP
Sbjct: 349 GNSTTPVTPTVPP--TSTSSTSTPPPP 373
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = -3
Query: 484 GGGGXPPPPXXXXGGGXPPPPXGGXPXGGGXPSXSSXXXPXXGXGXXPXPXXXXXGAGGG 305
G G P P G P P GG P +S G P AG G
Sbjct: 312 GWNGSPTPAAGNNTNGRPVAPRPSAGAGGANPPAASQPGLLGGSSNSAGPIAAATAAGVG 371
Query: 304 GGXFXXFXPGG 272
GG
Sbjct: 372 ADASDAANTGG 382
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +2
Query: 671 PPPPXXRXXPPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXAPXXPP 826
PPPP PP + +R PPPP P P PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSR---NVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = +2
Query: 674 PPPXXRXXPPPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXAPXXPPAXP 835
PPP PPPP P+ ++ + P PP P PP P
Sbjct: 238 PPP-----PPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 761 RXAXPXXRPPPPXPPXAP 814
+ A P PPPP PP P
Sbjct: 230 KQADPLPAPPPPPPPTLP 247
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 9.7
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -1
Query: 840 RGGXAG-GXXGAXGGXGG--GGRXXGXAXRXXXAXARAAXPXRG 718
RGG G G G GG GG GGR G AR+ P RG
Sbjct: 450 RGGRGGFGGRGGFGGRGGFGGGRGRG------RGGARSGNPNRG 487
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +2
Query: 698 PPPPXAXPRXGXAARAX--AXXXRXAXPXXRPPPPXPP 805
PPP A+ + A A P +PPPP PP
Sbjct: 191 PPPRRVSQNSSYASGSVPAATAASTASPVKKPPPPAPP 228
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 701 PPPXAXPRXGXAARAXAXXXRXAXPXXRPPPPXPPXAPXXPPA 829
PPP P+ AA A P P P AP PA
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAPA 408
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.152 0.554
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,300,647
Number of Sequences: 5004
Number of extensions: 50711
Number of successful extensions: 475
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 523262732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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