Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K05
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
02_05_0546 + 29889861-29890182,29891057-29892798                       29   3.7  
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 502 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 660
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>02_05_0546 + 29889861-29890182,29891057-29892798
          Length = 687

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 752 APSWAVCTNPRFSPTAAPYPXTIVLSSXPVXTTYXPGSSP 871
           AP +AV   PR  P  A  P T  ++S  + T   PGSSP
Sbjct: 33  APKFAVGV-PRNLPAVAALPATAPVTSASLVTLKPPGSSP 71


>07_03_0204 -
           15150854-15151147,15152230-15153689,15154055-15154266,
           15155123-15155275,15155569-15155630,15155733-15155785,
           15156380-15156452,15156499-15156619,15156699-15156878,
           15157333-15157391
          Length = 888

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -3

Query: 826 QDDSXRIRRSGRAEXGVRAHSPAWSXRPTPELRYLXSVSYEKAPRFPXGRKAD--RYPVS 653
           +D S    +SG+ + G +A  P W+  P P   ++  + Y   P +P     D  RY  S
Sbjct: 299 EDASKAEHKSGQ-QMGYQAAYPPWAMHPPP--YHMQGMPYYPGPYYPPYPPVDDPRYHYS 355

Query: 652 GR 647
           GR
Sbjct: 356 GR 357


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 282 NESAN---ARGEAVCVLGALPLPRSLTRCAR 365
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,817,379
Number of Sequences: 37544
Number of extensions: 486618
Number of successful extensions: 1402
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)