Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K03
(845 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0763 - 24405525-24405701,24406209-24406368,24406924-244070... 101 7e-22
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 62 5e-10
12_02_0699 + 22245933-22246213,22246493-22246575,22246844-222471... 31 0.87
03_05_0757 + 27478425-27479016,27479202-27479277,27479366-274794... 30 2.0
02_02_0467 - 10620976-10621299 30 2.0
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 4.7
02_04_0440 + 22954950-22955213,22955317-22956621,22956791-22957522 29 6.2
07_03_0719 + 20920331-20920535,20920588-20920763,20920901-209211... 28 8.1
07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913 28 8.1
07_01_0569 - 4223494-4224261,4224770-4225090 28 8.1
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 8.1
>06_03_0763 -
24405525-24405701,24406209-24406368,24406924-24407005,
24407098-24407167,24407443-24407607,24407731-24407874,
24408467-24408715,24409006-24409221,24409306-24409398
Length = 451
Score = 101 bits (242), Expect = 7e-22
Identities = 49/103 (47%), Positives = 72/103 (69%)
Frame = +3
Query: 279 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 458
R +K+FSG+++ LAQ+I LG+DLGKV+ K+F++ E V++ ESVRG DV++VQ
Sbjct: 86 RDSRLKIFSGTANRPLAQEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPT 145
Query: 459 SGEINDNLMELLIMINACKIASASRVTAVIPWLPVRAARQKRQ 587
+N+NLMEL +MI+AC+ ASA +T VIP+ A +K Q
Sbjct: 146 CSPVNENLMELFVMIDACRRASARSITVVIPYFGYARADRKAQ 188
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +1
Query: 556 FPYARQDKKDKSRAPITAKLVANILSVSGADHIITMDLHASQIQGFFDIP 705
F YAR D+K + R ITAKL AN+L+ +G+D +I D+H++Q G+FDIP
Sbjct: 178 FGYARADRKAQGREAITAKLSANLLTEAGSDRVIVCDIHSTQALGYFDIP 227
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +1
Query: 556 FPYARQDKKDKSRAPITAKLVANILSVSGADHIITMDLHASQIQGFFDIP 705
F YAR D+K + R I AKLVAN+++ +GA+ ++ DLH+SQ G+FDIP
Sbjct: 142 FGYARADRKSQGRESIAAKLVANMITEAGANRVLVCDLHSSQAMGYFDIP 191
Score = 36.7 bits (81), Expect = 0.023
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +3
Query: 291 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKK 383
+++FSG+++P L+Q+I LG++LGK+ K+
Sbjct: 98 LRIFSGTANPSLSQEIASYLGLELGKINIKR 128
>12_02_0699 +
22245933-22246213,22246493-22246575,22246844-22247125,
22248725-22248986,22250146-22251781,22251910-22252416
Length = 1016
Score = 31.5 bits (68), Expect = 0.87
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 591 QSPDHGQTRCQHPFSVWSRSHHHYGS 668
Q PDH TRC++ VW R H + S
Sbjct: 12 QKPDHPPTRCRYQAKVWFRRHCFFQS 37
>03_05_0757 +
27478425-27479016,27479202-27479277,27479366-27479481,
27481043-27481608
Length = 449
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 614 SLPTSFQCLEPITSSLWIFMRRKFKDSLIFRVDNLFAEPRSVKM 745
SLPT+F+ T S W+ + R F + LI+ DNL PR+V M
Sbjct: 252 SLPTAFKLF---TGSAWMVLSRPFVEYLIWGWDNL---PRTVLM 289
>02_02_0467 - 10620976-10621299
Length = 107
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 591 QSPDHGQTRCQHPFSVWSRSHHHYGS 668
Q PDH TRC+ VW R H + S
Sbjct: 12 QKPDHPPTRCRSQAKVWFRRHCFFQS 37
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 573 RQKRQEQSPDHGQTRCQ-HPFSVWSRSHHHYGS 668
R+K++ +SP H + + HP +S+ HH +G+
Sbjct: 1554 RKKQKPESPPHAHPQGRNHPVKFFSKMHHMFGT 1586
>02_04_0440 + 22954950-22955213,22955317-22956621,22956791-22957522
Length = 766
Score = 28.7 bits (61), Expect = 6.2
Identities = 28/85 (32%), Positives = 40/85 (47%)
Frame = +3
Query: 105 VALRTLIDKWTRQFK*FISVLSLRIAPLATTSGLVSMKSTITLEDVVNKLDHVLPLTTRM 284
+ L + K + K I+ L R P + L S + T+TL+DV L LP+ R
Sbjct: 117 LGLSQICQKMPQLDKALITALVERWRPETHSFHLASGEMTVTLQDVSMLL--ALPIDGR- 173
Query: 285 PNIKVFSGSSHPDLAQKIVDRLGID 359
V S + H D AQ ++D LG D
Sbjct: 174 ---PVCSTTDH-DYAQMVIDCLGHD 194
>07_03_0719 +
20920331-20920535,20920588-20920763,20920901-20921111,
20921240-20921477,20921613-20921763,20921878-20922186
Length = 429
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 529 RE*PPSYLG-FPYARQDKKDKSRAPITAKLVANILSVSGADHIITMDLHASQI 684
R PP LG FP ++ KK++ L+A +L G + TM + Q+
Sbjct: 31 RRAPPRLLGMFPLDQEAKKERCARAFADTLLAPMLHCPGTVSVPTMSMEMEQV 83
>07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913
Length = 213
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 555 LPVRAARQKRQEQSPDHGQTRCQHPFSVWSRSHHHYGS 668
LP + Q PDH RC+ VW R H + S
Sbjct: 12 LPKNLITRLGTPQKPDHPPIRCRSQAKVWFRRHCFFQS 49
>07_01_0569 - 4223494-4224261,4224770-4225090
Length = 362
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +3
Query: 459 SGEINDNLMELLIMINACKIASASRV------TAVIPWLPVRAARQKRQEQSPD-HGQTR 617
S E ND++ + IN C +SA V T + P + A +KR+ + + H QTR
Sbjct: 136 SNEANDHITKRHKAINLCPSSSARNVKKKLELTRMPPDDSIPGASKKRRVDAHEVHRQTR 195
Query: 618 CQHPFSVWSRSHHHYGSSCVANS 686
P V +++ H C +S
Sbjct: 196 KPQPLKVSAKNDIHRDLFCRPSS 218
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 570 ARQKRQEQSPDHGQTRCQHPFSVWSR 647
+ Q ++++PD +T C+ P VWS+
Sbjct: 487 SEQNSEDENPDSSRTACETPKWVWSK 512
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,047,443
Number of Sequences: 37544
Number of extensions: 451169
Number of successful extensions: 1198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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