Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K01
(979 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.18
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.94
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.0
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 5.0
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 5.0
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 24 6.3
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.7
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.3 bits (85), Expect = 0.008
Identities = 36/147 (24%), Positives = 36/147 (24%), Gaps = 1/147 (0%)
Frame = -1
Query: 973 GGGAGXAGXXGGXXGRXXAXXGXPXPXXXXXAGXAXRXXAXXXPGXPXXXREXGXXXRXG 794
GGG G G GG G P P G P G G
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Query: 793 XXXXXXGXXXGXXGGPXGXXXXGXXXXAXXXGGXXGG-GXXXXXXXXXXXXXXGXGPPXG 617
G G GG G G GG GG G G G G
Sbjct: 89 GCGGGGGGCGG--GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 616 XXXGXGXEXXXGXRGXXGSXGGXXTGG 536
G G G G GG GG
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.3 bits (85), Expect = 0.008
Identities = 36/147 (24%), Positives = 36/147 (24%), Gaps = 1/147 (0%)
Frame = -1
Query: 973 GGGAGXAGXXGGXXGRXXAXXGXPXPXXXXXAGXAXRXXAXXXPGXPXXXREXGXXXRXG 794
GGG G G GG G P P G P G G
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Query: 793 XXXXXXGXXXGXXGGPXGXXXXGXXXXAXXXGGXXGG-GXXXXXXXXXXXXXXGXGPPXG 617
G G GG G G GG GG G G G G
Sbjct: 89 GCGGGGGGCGG--GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 616 XXXGXGXEXXXGXRGXXGSXGGXXTGG 536
G G G G GG GG
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGG 173
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/102 (25%), Positives = 27/102 (26%)
Frame = +2
Query: 668 PXXXXPPXXSXXXXGXXTXPXPXXXSXPPXXPXPXPXXPXXXXXSXPXPXFPXXXXXXXX 847
P PP S G + P P PP P P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 848 XXXPXPXGXPRXXGXXXXXXXXXXXXXXXPPPXXPGXPRPPP 973
P P PR G PPP G P PPP
Sbjct: 294 AGSPPPPPPPR--GSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 850 PXPXPXRPPPPXXXXXGXGXXXXXXXXXXXPRXXRPPPPPP 972
P P PPPP G PR PPPPPP
Sbjct: 265 PPPRTGSPPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP 701
PP P P S P P P G P P PPP PP
Sbjct: 257 PPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/102 (25%), Positives = 27/102 (26%)
Frame = +2
Query: 668 PXXXXPPXXSXXXXGXXTXPXPXXXSXPPXXPXPXPXXPXXXXXSXPXPXFPXXXXXXXX 847
P PP S G + P P PP P P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 848 XXXPXPXGXPRXXGXXXXXXXXXXXXXXXPPPXXPGXPRPPP 973
P P PR G PPP G P PPP
Sbjct: 315 AGSPPPPPPPR--GSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 850 PXPXPXRPPPPXXXXXGXGXXXXXXXXXXXPRXXRPPPPPP 972
P P PPPP G PR PPPPPP
Sbjct: 286 PPPRTGSPPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP 701
PP P P S P P P G P P PPP PP
Sbjct: 278 PPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/102 (25%), Positives = 27/102 (26%)
Frame = +2
Query: 668 PXXXXPPXXSXXXXGXXTXPXPXXXSXPPXXPXPXPXXPXXXXXSXPXPXFPXXXXXXXX 847
P PP S G + P P PP P P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 848 XXXPXPXGXPRXXGXXXXXXXXXXXXXXXPPPXXPGXPRPPP 973
P P PR G PPP G P PPP
Sbjct: 300 AGSPPPPPPPR--GSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 850 PXPXPXRPPPPXXXXXGXGXXXXXXXXXXXPRXXRPPPPPP 972
P P PPPP G PR PPPPPP
Sbjct: 271 PPPRTGSPPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP 701
PP P P S P P P G P P PPP PP
Sbjct: 263 PPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 31.5 bits (68), Expect = 0.94
Identities = 32/145 (22%), Positives = 34/145 (23%), Gaps = 1/145 (0%)
Frame = +3
Query: 540 PVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXX 719
P+ PP DP P + P P G PP PP
Sbjct: 134 PITCPPKDPSCVKCPEGPAGPPGPEGPAGPAGSDGQPGAPGDAGKDGPP--GPPGPDGDS 191
Query: 720 XXPXXXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXG 899
P G P P P P G PG P G
Sbjct: 192 GPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPG 251
Query: 900 -XGXPXXAXXRPXXPPXXPAXPAPP 971
G P A P P P P P
Sbjct: 252 QDGTPGNAG--PDGQPGSPGGPGLP 274
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXP 698
PP PP D P+ P P P G P P PPP P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = +3
Query: 555 PXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPXX 734
P DP P P P P P P P P PP P
Sbjct: 197 PVDPSDEPSPSGPPSPGPVD-PSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTR 255
Query: 735 XXPXGPPXXPXXXPXXXXXXPXR 803
P GPP P P P R
Sbjct: 256 R-PPGPPGPPTRRPPGPPGPPTR 277
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/74 (24%), Positives = 18/74 (24%)
Frame = +3
Query: 555 PXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPXX 734
P P P P P P GP PP P P
Sbjct: 206 PSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPT 265
Query: 735 XXPXGPPXXPXXXP 776
P GPP P P
Sbjct: 266 RRPPGPPGPPTRRP 279
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP--XXX 710
PP LPP P P P P GGP P PPP PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLP-PI---TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 711 AXXXXPXXXXPXGPPXXP 764
P GPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXA 713
PP P L P P P P G P P PPP PP A
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPGMFA 794
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP--XXX 710
PP LPP P P P P GGP P PPP PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLP-PI---TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 711 AXXXXPXXXXPXGPPXXP 764
P GPP P
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXA 713
PP P L P P P P G P P PPP PP A
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPGMFA 794
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPP--XXX 710
PP LPP P P P P GGP P PPP PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLP-PI---TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 711 AXXXXPXXXXPXGPPXXP 764
P GPP P
Sbjct: 354 PPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXA 713
PP P L P P P P G P P PPP PP A
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPGMFA 377
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP +P PL P P P G P P PP PP P
Sbjct: 124 PPKEPCEPLTP-----PPCKPCPEGPPGPAGPPGPDGNKGPLGPP--GPPGPEGPNGEPG 176
Query: 732 XXXPXGPP 755
P GPP
Sbjct: 177 NKGPAGPP 184
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/121 (22%), Positives = 30/121 (24%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAX 716
PP P P P P + P G P P P P +
Sbjct: 159 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGEST 218
Query: 717 XXXPXXXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXX 896
P P GPP P P P P + G PG A P
Sbjct: 219 YPEPAGPGPAGPP-GPAGPPGPDGASP--TAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 275
Query: 897 G 899
G
Sbjct: 276 G 276
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/141 (20%), Positives = 30/141 (21%), Gaps = 1/141 (0%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP P P P P P P P PP P
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 165
Query: 732 XXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXGXGXP 911
G P P P P G PG A G P
Sbjct: 166 DPGEAGTPGRPGTDAAPGSPGPRGPPGPAGE--AGAPGPAGEPGTPAISEPLTPGAPGEP 223
Query: 912 XXA-XXRPXXPPXXPAXPAPP 971
+ P PP P PP
Sbjct: 224 GDSGPPGPPGPPGAPGNDGPP 244
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/121 (22%), Positives = 30/121 (24%)
Frame = +3
Query: 537 PPVXLPPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAX 716
PP P P P P + P G P P P P +
Sbjct: 158 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGEST 217
Query: 717 XXXPXXXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXX 896
P P GPP P P P P + G PG A P
Sbjct: 218 YPEPAAPGPAGPP-GPAGPPGPDGASP--TAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 274
Query: 897 G 899
G
Sbjct: 275 G 275
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/141 (20%), Positives = 30/141 (21%), Gaps = 1/141 (0%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP P P P P P P P PP P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 732 XXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXGXGXP 911
G P P P P G PG A G P
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGPPGPAGE--AGAPGPAGEPGTPAISEPLTPGAPGEP 218
Query: 912 XXA-XXRPXXPPXXPAXPAPP 971
+ P PP P PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPP 239
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/141 (20%), Positives = 30/141 (21%), Gaps = 1/141 (0%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP P P P P P P P PP P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 732 XXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXGXGXP 911
G P P P P G PG A G P
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGPPGPAGE--AGAPGPAGEPGTPAISEPLTPGAPGEP 218
Query: 912 XXA-XXRPXXPPXXPAXPAPP 971
+ P PP P PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPP 239
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 24.2 bits (50), Expect(2) = 6.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 940 PRXXRPPPPPP 972
P RPPPPPP
Sbjct: 29 PPPARPPPPPP 39
Score = 23.0 bits (47), Expect(2) = 6.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 844 GXPXPXPXRPPPP 882
G P P RPPPP
Sbjct: 25 GKGRPPPARPPPP 37
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.7
Identities = 29/137 (21%), Positives = 30/137 (21%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP P P P P P P P PP P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Query: 732 XXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXGXGXP 911
G P P P P G PG + A G P
Sbjct: 164 DSGEPGSPGLPGQDAAPGEPGPKGPPGPPG--APGAPGTPGEPGVPAQSEPLIPGEPGPP 221
Query: 912 XXAXXRPXXPPXXPAXP 962
A P PP P P
Sbjct: 222 GEAG--PQGPPGSPGQP 236
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.7
Identities = 29/137 (21%), Positives = 30/137 (21%)
Frame = +3
Query: 552 PPXDPXXPLXPXXXSXPXPXXXPXGGPXPXXXXXXXXXXXXXXPPPXXPPXXXAXXXXPX 731
PP P P P P P P P PP P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Query: 732 XXXPXGPPXXPXXXPXXXXXXPXRXXXPXSRXLXGXPGXXXAXXLXAXPAXXXXXGXGXP 911
G P P P P G PG + A G P
Sbjct: 164 DSGEPGSPGLPGQDAAPGEPGPKGPPGPPG--APGAPGTPGEPGVPAQSEPLIPGEPGPP 221
Query: 912 XXAXXRPXXPPXXPAXP 962
A P PP P P
Sbjct: 222 GEAG--PQGPPGSPGQP 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,751,681
Number of Sequences: 27780
Number of extensions: 247100
Number of successful extensions: 2103
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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