Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J24
         (927 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p pro...    41   0.002
AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA prote...    41   0.002
AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA prote...    41   0.002
AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix...    41   0.002
AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA...    41   0.002
AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix...    41   0.002

>AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p
           protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


>AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA protein
           (WHN-homologue) protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


>AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA protein
           protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


>AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix
           protein jumeaux protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


>AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA
           protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


>AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix
           nude transcriptionfactor protein.
          Length = 719

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 128 MCEIQDFSIEQKDIYSNKYXWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 298
           M E++D+S    + + +KY   +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 299 S 301
           S
Sbjct: 61  S 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,013,463
Number of Sequences: 53049
Number of extensions: 358794
Number of successful extensions: 843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)