Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_J23
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog, ubiqui... 47 8e-05
AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein ... 47 8e-05
AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI) p... 47 8e-05
AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein ... 47 8e-05
AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homol... 32 3.1
AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump p... 30 9.5
AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump p... 30 9.5
AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein. 30 9.5
>BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog,
ubiquitin-conjugating enzyme E2 binding protein, 1
(Drosophila protein.
Length = 557
Score = 47.2 bits (107), Expect = 8e-05
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 279 EEYPYEVLSTEEIVQHMVDCIKEVNTVVE 365
E+Y YEVL+ E+I+QHMV+CI+EVN V++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNEVIQ 125
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 388 LTESFQMGQKKLMERFYDGDQXQLFSEARV 477
L F ++KLMER++DG+ +LF+E V
Sbjct: 134 LLSHFNWDKEKLMERYFDGNLEKLFAECHV 163
>AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 47.2 bits (107), Expect = 8e-05
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 279 EEYPYEVLSTEEIVQHMVDCIKEVNTVVE 365
E+Y YEVL+ E+I+QHMV+CI+EVN V++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNEVIQ 125
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 388 LTESFQMGQKKLMERFYDGDQXQLFSEARV 477
L F ++KLMER++DG+ +LF+E V
Sbjct: 134 LLSHFNWDKEKLMERYFDGNLEKLFAECHV 163
>AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI)
protein.
Length = 463
Score = 47.2 bits (107), Expect = 8e-05
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 279 EEYPYEVLSTEEIVQHMVDCIKEVNTVVE 365
E+Y YEVL+ E+I+QHMV+CI+EVN V++
Sbjct: 3 EDYRYEVLTAEQILQHMVECIREVNEVIQ 31
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 388 LTESFQMGQKKLMERFYDGDQXQLFSEARV 477
L F ++KLMER++DG+ +LF+E V
Sbjct: 40 LLSHFNWDKEKLMERYFDGNLEKLFAECHV 69
>AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 47.2 bits (107), Expect = 8e-05
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 279 EEYPYEVLSTEEIVQHMVDCIKEVNTVVE 365
E+Y YEVL+ E+I+QHMV+CI+EVN V++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNDVIQ 125
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 388 LTESFQMGQKKLMERFYDGDQXQLFSEARV 477
L F ++KLMER++DG+ +LF+E V
Sbjct: 134 LLSHFNWDKEKLMERYFDGNLEKLFAECHV 163
>AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homolog
variant protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 388 LTESFQMGQKKLMERFYDGDQXQLFSEARV 477
L F ++KLMER++DG+ +LF+E V
Sbjct: 103 LLSHFNWDKEKLMERYFDGNLEKLFAECHV 132
>AF136523-1|AAD28285.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +1
Query: 418 KLMERFYDGDQXQLF------SEARVSFHXGNLSYKAKAPRRISXSGMXNVKY 558
+L+ERFYD DQ ++ + V F N+ ++ P + S M N+KY
Sbjct: 1124 QLLERFYDPDQGKVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFACSIMDNIKY 1176
>AF091582-1|AAC77455.1| 1321|Homo sapiens bile salt export pump
protein.
Length = 1321
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +1
Query: 418 KLMERFYDGDQXQLF------SEARVSFHXGNLSYKAKAPRRISXSGMXNVKY 558
+L+ERFYD DQ ++ + V F N+ ++ P + S M N+KY
Sbjct: 1124 QLLERFYDPDQGKVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFACSIMDNIKY 1176
>AC069137-4|AAY24100.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +1
Query: 418 KLMERFYDGDQXQLF------SEARVSFHXGNLSYKAKAPRRISXSGMXNVKY 558
+L+ERFYD DQ ++ + V F N+ ++ P + S M N+KY
Sbjct: 254 QLLERFYDPDQGKVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFACSIMDNIKY 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,967,416
Number of Sequences: 237096
Number of extensions: 1560010
Number of successful extensions: 4667
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4660
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -