Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J22
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.5  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   2.0  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   2.0  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   2.0  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   2.0  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   2.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   6.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   6.2  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 494 TTKLQLSKNVICAHCKGVGGK 556
           +T L+L    I  HC+ VGGK
Sbjct: 35  STILRLDPKFIALHCQEVGGK 55


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = -2

Query: 498 VVFPAYKXSNVTAR--GCMVSSPRTGPRXDHILYSHPFQRGYQRNYXKFHQP 349
           V FP Y   N   R  G  VS     PR  +I    PF R    N  +FH P
Sbjct: 115 VPFPVY-YGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPP 165


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = -2

Query: 498 VVFPAYKXSNVTAR--GCMVSSPRTGPRXDHILYSHPFQRGYQRNYXKFHQP 349
           V FP Y   N   R  G  VS     PR  +I    PF R    N  +FH P
Sbjct: 115 VPFPVY-YGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPP 165


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = -2

Query: 498 VVFPAYKXSNVTAR--GCMVSSPRTGPRXDHILYSHPFQRGYQRNYXKFHQP 349
           V FP Y   N   R  G  VS     PR  +I    PF R    N  +FH P
Sbjct: 115 VPFPVY-YGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPP 165


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = -2

Query: 498 VVFPAYKXSNVTAR--GCMVSSPRTGPRXDHILYSHPFQRGYQRNYXKFHQP 349
           V FP Y   N   R  G  VS     PR  +I    PF R    N  +FH P
Sbjct: 115 VPFPVY-YGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAYRFHPP 165


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 93  TSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFH 206
           T RE+  + K+   L  + N + +  K NY+   K+ +
Sbjct: 304 TERERSKERKIISSLSNNYNYNNNNYKYNYNNYNKKLY 341


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = +3

Query: 87  SSTSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPD 212
           SSTS E+  + K    L   K       ++     A  FH D
Sbjct: 756 SSTSSEESREEKATTSLEAEKREKSEHCEKGKEYYAASFHTD 797


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -2

Query: 405 YSHPFQRGYQRNYXKFHQPETLLLGRLPV 319
           Y++ +   Y  NY K ++   + + ++PV
Sbjct: 101 YNNNYNNNYNNNYKKLYKNYIINIEQIPV 129


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -2

Query: 405 YSHPFQRGYQRNYXKFHQPETLLLGRLPV 319
           Y++ +   Y  NY K ++   + + ++PV
Sbjct: 101 YNNNYNNNYNNNYKKLYKNYIINIEQIPV 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,220
Number of Sequences: 438
Number of extensions: 3993
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)