Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_J19
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 44 1e-04
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 44 1e-04
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 44 1e-04
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.38
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.87
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.87
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.87
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 0.87
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.1
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 31 1.5
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 31 1.5
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 31 1.5
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 30 2.0
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 30 2.7
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 30 2.7
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 30 2.7
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 30 2.7
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 30 2.7
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.5
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 3.5
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 6.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.1
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 6.1
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 6.1
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.1
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 6.1
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.1
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.1
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 8.1
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 28 8.1
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 28 8.1
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.1
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 28 8.1
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 28 8.1
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 28 8.1
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 28 8.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.1
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 28 8.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 28 8.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRGX 855
PP S PP G PPP PP P PP P P P P RG
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 856 RGRXXXXXXXGGGSPXXGG 912
GGSP G
Sbjct: 307 PPTGSLPPPQAGGSPPPAG 325
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPP GG+PP PP P G P + G P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPP--XSPXGXKGGPGXPXXRXGXXP 793
PPP G+PP PP SP G P R G P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRGX 855
PP S PP G PPP PP P PP P P P P RG
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 856 RGRXXXXXXXGGGSPXXGG 912
GGSP G
Sbjct: 328 PPTGSLPPPQAGGSPPPAG 346
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPP GG+PP PP P G P + G P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPP--XSPXGXKGGPGXPXXRXGXXP 793
PPP G+PP PP SP G P R G P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRGX 855
PP S PP G PPP PP P PP P P P P RG
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 856 RGRXXXXXXXGGGSPXXGG 912
GGSP G
Sbjct: 313 PPTGSLPPPQAGGSPPPAG 331
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPP GG+PP PP P G P + G P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPP--XSPXGXKGGPGXPXXRXGXXP 793
PPP G+PP PP SP G P R G P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -1
Query: 912 PPGXGGT--PPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPG GG PP G PP G GGPG P G P
Sbjct: 183 PPGHGGQGGPPGHGGMGGPPPGQ--GGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -1
Query: 912 PPGXGGT--PPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPG GG PP G PP G GGPG P G P
Sbjct: 463 PPGHGGQGGPPGHGGMGGPPPGQ--GGPGGPGGPGGPGGMLP 502
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP G PPP PP+ PP PP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGX---KGGPGXPXXRXGXXP 793
PPP GG PP G PP P G GGP P G P
Sbjct: 728 PPPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXG----XXPPXSPXGXKGGPGXP 817
PP GG PP G PP P G KGGP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 703 PPXXXGGXPP-PGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
PP GG PP G PP P PP PP P GP P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 691 SXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
S PP G PPPG P PPG P P L P G
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 756
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP GG PPP PP PP PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +2
Query: 818 GXPGPPXXPXGXXG--GXXPXXXXXGGVPPXPGG 913
G P PP P G G P GG+PP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +2
Query: 818 GXPGPPXXPXGXX---GGXXPXXXXXGGVPPXP 907
G P PP P G GG P GG PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP G PPP PP+ PP PP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGX---KGGPGXPXXRXGXXP 793
PPP GG PP G PP P G GGP P G P
Sbjct: 728 PPPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXG----XXPPXSPXGXKGGPGXP 817
PP GG PP G PP P G KGGP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 703 PPXXXGGXPP-PGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
PP GG PP G PP P PP PP P GP P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 691 SXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
S PP G PPPG P PPG P P L P G
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 756
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP GG PPP PP PP PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +2
Query: 818 GXPGPPXXPXGXXG--GXXPXXXXXGGVPPXPGG 913
G P PP P G G P GG+PP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +2
Query: 818 GXPGPPXXPXGXX---GGXXPXXXXXGGVPPXP 907
G P PP P G GG P GG PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP G PPP PP+ PP PP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGX---KGGPGXPXXRXGXXP 793
PPP GG PP G PP P G GGP P G P
Sbjct: 311 PPPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXG----XXPPXSPXGXKGGPGXP 817
PP GG PP G PP P G KGGP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 703 PPXXXGGXPP-PGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
PP GG PP G PP P PP PP P GP P G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 691 SXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRG 852
S PP G PPPG P PPG P P L P G
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 339
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
PP PP GG PPP PP PP PP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPP-PPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +2
Query: 818 GXPGPPXXPXGXXG--GXXPXXXXXGGVPPXPGG 913
G P PP P G G P GG+PP GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +2
Query: 818 GXPGPPXXPXGXX---GGXXPXXXXXGGVPPXP 907
G P PP P G GG P GG PP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P P G G PG P
Sbjct: 266 PPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQP 297
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 718 GGXPPPGXXXXPPVXPLXXPPGAPPXXXXXP 810
G PP PP P PPGAPP P
Sbjct: 740 GAMRPPAGFAPPPGAPYGYPPGAPPPAGFHP 770
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G G P P G +GGPG P
Sbjct: 177 PPGLKGIDGEDGAPGETGPTGPPGYRGGPGAP 208
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G G P P G +GGPG P
Sbjct: 214 PPGLKGIDGEDGAPGETGPTGPPGYRGGPGAP 245
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G G P P G +GGPG P
Sbjct: 198 PPGLKGIDGEDGAPGETGPTGPPGYRGGPGAP 229
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = -2
Query: 848 RXGXRAGPXXRXXGXXXXXGGAPGGXXRG-XTGGXXXXPGGGXPPXX*GGXXXDXXQGGR 672
R G R R G GG GG RG GG GGG GG +GGR
Sbjct: 513 RGGFRGRSGDRDGGFRGGFGGRGGGGFRGGDRGGFRGRGGGGGFRGGRGGDRGGGFRGGR 572
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P P G G PG P
Sbjct: 217 PPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHP 248
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P P G G PG P
Sbjct: 217 PPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHP 248
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -1
Query: 915 PPPGXGGTPPXXXXXGXXPPXSPXGXKG-GPGXPXXRXGXXP 793
PPP GG PP G PP P G P P + P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNP 138
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 915 PPPGXGG-TPPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPPG GG PP G PP P GG P G P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPP--MMGGIPPPPPMFGAPP 115
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P G GGPG P
Sbjct: 153 PPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQP 184
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 911 PPXXGEPPPXXXXXXXRPRXPRXGXRAGP-XXRXXGXXXXXGGAPGGXXRGXTGGXXXXP 735
P G P P +P P RAGP R GAPG + G P
Sbjct: 199 PGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGEP 258
Query: 734 GGGXPPXX*GGXXXDXXQG 678
G P G D G
Sbjct: 259 GQDGAPGQPGLPGSDGTPG 277
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P P G G PG P
Sbjct: 215 PPGAPGQPGSGSTPGPAGPPGPPGPNGQPGHP 246
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 909 PGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PG G P G P P G GGPG P
Sbjct: 377 PGNPGPPGTDGYPGAPGPAGPIGNTGGPGLP 407
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 909 PGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PG G P G P P G GGPG P
Sbjct: 376 PGNPGPPGTDGYPGAPGPAGPIGNTGGPGLP 406
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 909 PGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PG G P G P P G GGPG P
Sbjct: 376 PGNPGPPGTDGYPGAPGPAGPIGNTGGPGLP 406
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 909 PGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PG G P G P P G GGPG P
Sbjct: 377 PGNPGPPGTDGYPGAPGPAGPIGNTGGPGLP 407
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 909 PGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PG G P G P P G GGPG P
Sbjct: 413 PGNPGPPGTDGYPGAPGPAGPIGNTGGPGLP 443
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 818 RXXGXXXXXGGAPGGXXRGXTGGXXXXPGGGXPPXX*GGXXXDXXQGG 675
R G GG+ GG RG GG GGG GG GG
Sbjct: 4 RGYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGG 51
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 703 PPXXXGGXPPPGXXXXPPVXPLXXPPGAPP 792
PP PPP PP P+ PP PP
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = +1
Query: 721 GXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXRGXRGRXXXXXXXGGGSP 900
G PPP PP+ G PP P R P P RG GG P
Sbjct: 1480 GMPPPMRGGGPPMR------GGPPMRGGPPMFRGGPPG--PGRGMPSPMMRGSSMRGGFP 1531
Query: 901 XXGGG 915
GGG
Sbjct: 1532 QRGGG 1536
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPG 823
PPG GTP G P P G G PG
Sbjct: 227 PPGQPGTPGQNGQPGQPGPKGPSGQPGQPG 256
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G+P G P G G PG P
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQP 261
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G+P G P G G PG P
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQP 261
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G+P G P G G PG P
Sbjct: 230 PPGPAGSPGAPGGPGQAGAPGPKGPSGAPGQP 261
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPG 823
PPG G P G P P G G PG
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNPG 211
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXR 849
PP PP G PPP PP P PP P P + P R
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPG 823
PPG G P G P P G G PG
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNPG 211
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = -2
Query: 734 GGGXPPXX*GGXXXDXXQGGRSPLXXAXXAAXXRFXPFAALCSXVXPAXSPDSVXTXXPP 555
GGG P D +GG +P A A+ P AA PA +P++ P
Sbjct: 80 GGGSYPAKKRRVARDYAEGGAAPAAPAEPASAPAPAPEAAPAPEPTPAPAPEAAPAPAPD 139
Query: 554 LSEXIP 537
+ P
Sbjct: 140 AAPTAP 145
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 229 PPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPG 267
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 196 PPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPG 234
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 229 PPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPG 267
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 898 GNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
G P G G P P G GR G P G G
Sbjct: 148 GRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPG 181
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 898 GNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
G P G G P P G GR G P G G
Sbjct: 148 GRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPG 181
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPG 267
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 228 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPG 266
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXPXR 849
PP PP G PPP PP P PP P P + P R
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P G G PG P
Sbjct: 235 PPGPSGAPGAPGGPGYPGPPGQKGPSGAPGQP 266
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPG 267
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = -1
Query: 915 PP--PGXGGTPPXXXXXGXXPPXSPXGXKGGPG 823
PP PG G P G P P G GGPG
Sbjct: 182 PPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPG 214
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXP 843
PP S PP PPPG PP P PP PP P P P
Sbjct: 288 PPPPSSGMWPPPPP---PPPGRTPGPPGMP-GMPPPPPPSRFGPPGMGGMPPPPPP 339
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = -2
Query: 890 PPXXXXXXXRPRXPRXGXRAGPXXRXXGXXXXXGGAPGGXXRGXTGGXXXXPGGG 726
PP P P G G G G GG G GG GGG
Sbjct: 417 PPPPSDFIDIPNDPTLGGPTGSSGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGG 471
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 237 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 268
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 299 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 330
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 232 PPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPG 270
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 236 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 267
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 236 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 267
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 237 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 268
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
P G G+P G P P G GG G P
Sbjct: 237 PAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSP 268
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 676 PP*XXSXXXPPXXXGGXPPPGXXXXPPVXPLXXPPGAPPXXXXXPXXRXXGPALXP 843
PP S PP PPPG PP P PP PP P P P
Sbjct: 298 PPPPSSGMWPPPPP---PPPGRTPGPPGMP-GMPPPPPPSRFGPPGMGGMPPPPPP 349
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 913 PPRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
PP G P G G P P G G+ G P G
Sbjct: 232 PPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPG 270
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -3
Query: 910 PRXXGNPPXXGXXGXXAPXXPXGXXGRARXXGXPAGXG 797
P GN P G G P P G G G P G
Sbjct: 185 PGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPG 222
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXPXXRXGXXP 793
PPG G P G P P G +G G P + P
Sbjct: 144 PPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGP 183
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 912 PPGXGGTPPXXXXXGXXPPXSPXGXKGGPGXP 817
PPG G P G P G +G PG P
Sbjct: 132 PPGQNGPPGWAGRDGNIGPQGTPGGRGEPGGP 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,469,181
Number of Sequences: 27780
Number of extensions: 216212
Number of successful extensions: 3242
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2585
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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