Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J15
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0125 - 21011757-21012428                                         33   0.31 
07_01_0080 + 587674-588510                                             31   0.95 
07_01_0479 + 3606663-3607448                                           31   1.7  
03_03_0118 + 14597863-14597929,14598844-14599806,14599909-145999...    31   1.7  
05_01_0142 - 940421-940701,941262-941574                               29   3.8  
10_03_0023 - 7151465-7152111,7152222-7152405                           29   5.1  
02_01_0302 - 2021221-2023305                                           29   5.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   6.7  
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570           28   8.9  

>09_06_0125 - 21011757-21012428
          Length = 223

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 799 GGXFFXXPPGXXXPPXGGXPXPPRXXFXSPPP 894
           GG  F    G   PP    P PPR  F +PPP
Sbjct: 154 GGMKFSVAVGEPLPPPSPPPPPPRAPFLAPPP 185


>07_01_0080 + 587674-588510
          Length = 278

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +1

Query: 793 GXGGXFFXXPPGXXXPPXGGXPXPPRXXFXSPPP 894
           G  G F   PP    PP  G P PP      PPP
Sbjct: 83  GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPP 116


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 811 FXXPPGXXXPPXGGXPXPPRXXFXSPPPLFHP 906
           F  PPG      GG P PP      PPP+  P
Sbjct: 187 FQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPP 218


>03_03_0118 +
           14597863-14597929,14598844-14599806,14599909-14599936,
           14600288-14600666
          Length = 478

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 820 PPGXXXPPXGGXPXPPRXXFXSPPPLFHP 906
           P G   PP GG   PP   F +PP  F P
Sbjct: 400 PAGGFTPPAGGFGTPPLGGFGTPPSGFGP 428


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 811 FXXPPGXXXPPXGGXPXPPRXXFXSPPPLFHP 906
           +  PPG   PP G  P PP   +  PP  + P
Sbjct: 40  YPPPPGAYPPPPGAYPPPP-GAYPPPPGAYPP 70


>10_03_0023 - 7151465-7152111,7152222-7152405
          Length = 276

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +1

Query: 802 GXFFXXPPGXXXPPX-GGXPXPPRXXFXSPPPLFHP 906
           G FF   P    PP  GG P PP     +PP L  P
Sbjct: 167 GIFFPPLPLVPEPPNIGGVPIPPNPITPAPPSLVPP 202


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = +1

Query: 799 GGXFFXXPPGXXXPPXGGXPXPP--RXXFXSPPPLFHP 906
           GG     PP    PP G  P PP     + SPPP   P
Sbjct: 655 GGHGGGHPPSTSTPPGGKLPFPPVYGVSYASPPPPVKP 692


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 1/92 (1%)
 Frame = -2

Query: 893 GGGXKKXXRGGXGXPPXGGXXXPGGXXKXXPPXPXGXKGXR-XSXXXXXXXXXXXXXGXP 717
           GGG      GG   PP GG    GG     PP   G  G R  +                
Sbjct: 94  GGGAPGPLGGGGARPPGGGG---GGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGG 150

Query: 716 GGXPGIFXXPXGFATXXNXGXIXGXXXRGAXP 621
           GG  G    P G       G   G    G  P
Sbjct: 151 GGGGGALARPPGGGRGGALGRPPGGGGGGGGP 182



 Score = 28.7 bits (61), Expect = 6.7
 Identities = 27/111 (24%), Positives = 29/111 (26%), Gaps = 2/111 (1%)
 Frame = -2

Query: 893 GGGXKKXXRGGXGXPPXGGXXXPGGXXKXXPPXPXGXKGXRXSXXXXXXXXXXXXXGXPG 714
           GGG +    GG G PP       GG     P    G  G                   PG
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPG 162

Query: 713 GXPG--IFXXPXGFATXXNXGXIXGXXXRGAXPXEKSXQXGXFXGXWPFGG 567
           G  G  +   P G       G   G    G  P       G   G    GG
Sbjct: 163 GGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGG 213


>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
          Length = 378

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 711 SPXXPXXAPXFSPPFPLXRXSXPFXSXGXGGGXF 812
           SP  P  +P   PP P  +   P    G GGG F
Sbjct: 162 SPDPPEPSPPPPPPPPASKSDHPAPLYGEGGGGF 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,497,446
Number of Sequences: 37544
Number of extensions: 180568
Number of successful extensions: 628
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)