Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J15
         (906 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr...    32   2.5  
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col...    32   2.5  
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen...    32   2.5  
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.              32   2.5  
Z46389-1|CAA86523.1|  380|Homo sapiens vasodilator-stimulated ph...    31   7.6  
X98534-1|CAA67147.2|  378|Homo sapiens vasodilator-stimulated ph...    31   7.6  
BC038224-1|AAH38224.1|  380|Homo sapiens vasodilator-stimulated ...    31   7.6  
BC026019-1|AAH26019.1|  380|Homo sapiens vasodilator-stimulated ...    31   7.6  

>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
           protein.
          Length = 1078

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 893 GGGXKKXXRG--GXGXPPXGGXXXPGGXXKXXPPXPXGXKGXRXS 765
           GG  ++   G  G G PP G    PGG     PP P G KG R S
Sbjct: 675 GGKGERGAPGEKGEGGPP-GVAGPPGGSGPAGPPGPQGVKGERGS 718


>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
           collagen protein.
          Length = 1466

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 893 GGGXKKXXRG--GXGXPPXGGXXXPGGXXKXXPPXPXGXKGXRXS 765
           GG  ++   G  G G PP G    PGG     PP P G KG R S
Sbjct: 822 GGKGERGAPGEKGEGGPP-GVAGPPGGSGPAGPPGPQGVKGERGS 865


>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
           alpha 1 chain protein.
          Length = 1466

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 893 GGGXKKXXRG--GXGXPPXGGXXXPGGXXKXXPPXPXGXKGXRXS 765
           GG  ++   G  G G PP G    PGG     PP P G KG R S
Sbjct: 822 GGKGERGAPGEKGEGGPP-GVAGPPGGSGPAGPPGPQGVKGERGS 865


>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
          Length = 1466

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 893 GGGXKKXXRG--GXGXPPXGGXXXPGGXXKXXPPXPXGXKGXRXS 765
           GG  ++   G  G G PP G    PGG     PP P G KG R S
Sbjct: 822 GGKGERGAPGEKGEGGPP-GVAGPPGGSGPAGPPGPQGVKGERGS 865


>Z46389-1|CAA86523.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein (VASP) protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = +3

Query: 663 ISXGGKPPRXXKNPXXSPXXPXXAPXFSPPFPLXRXSXPFXSXGXGGGXFXXPP 824
           +S  G PP         P  P   P   PP  L     P  + G GGG    PP
Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPP 209


>X98534-1|CAA67147.2|  378|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 378

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = +3

Query: 663 ISXGGKPPRXXKNPXXSPXXPXXAPXFSPPFPLXRXSXPFXSXGXGGGXFXXPP 824
           +S  G PP         P  P   P   PP  L     P  + G GGG    PP
Sbjct: 154 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPP 207


>BC038224-1|AAH38224.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = +3

Query: 663 ISXGGKPPRXXKNPXXSPXXPXXAPXFSPPFPLXRXSXPFXSXGXGGGXFXXPP 824
           +S  G PP         P  P   P   PP  L     P  + G GGG    PP
Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPP 209


>BC026019-1|AAH26019.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = +3

Query: 663 ISXGGKPPRXXKNPXXSPXXPXXAPXFSPPFPLXRXSXPFXSXGXGGGXFXXPP 824
           +S  G PP         P  P   P   PP  L     P  + G GGG    PP
Sbjct: 157 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPP 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,284,507
Number of Sequences: 237096
Number of extensions: 1096527
Number of successful extensions: 4341
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4095
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)