Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_J04
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 98 9e-21
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 60 2e-09
06_01_0671 - 4899611-4899829,4900870-4901448 55 7e-08
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 52 8e-07
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 34 0.13
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 31 0.93
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846... 30 2.1
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 30 2.1
06_03_0251 + 18715023-18715106,18715274-18715396,18715509-187156... 30 2.8
02_04_0585 - 24088344-24089366,24089833-24090075,24090305-240906... 29 6.5
01_06_1608 - 38612754-38616947,38617030-38617095 29 6.5
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 8.6
07_01_0284 - 2082249-2082256,2082496-2083009 28 8.6
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 97.9 bits (233), Expect = 9e-21
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +3
Query: 210 APKVQKPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAK 386
AP V APDF A AV + EF +KLSD+ GK YV+LFFYPLDFTFVCPTE+ AFSD+
Sbjct: 67 APLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYD 126
Query: 387 DFAGIDCQVIGVSTDSEFS 443
+F ++ +++GVS DS +S
Sbjct: 127 EFEKLNTEILGVSIDSVWS 145
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 438 FSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALRGLFIIDRNGTL 608
FSHLAW+ T RK GGLG ++ PL++D K ISK + VL+ D G ALRGLFIID+ G +
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVI 269
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 644 RSVDXTLRLVKAFQFA-DKXXKVCPAG 721
RSVD T+R ++A Q+ D +VCPAG
Sbjct: 281 RSVDETMRTLQALQYVQDNPDEVCPAG 307
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +3
Query: 276 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 452
++++ DF G YV+LF +P DFT VC TEL A + AK+F +++G+S D SH
Sbjct: 56 KIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKD 115
Query: 453 WINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDD 560
WI ++ P++AD ++ K +++ D
Sbjct: 116 WIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPD 151
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 55.2 bits (127), Expect = 7e-08
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Frame = +3
Query: 90 KSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAVVNGE 269
+S + HA +++QLS + A +VA+ + S+ + K AP+F+ + +
Sbjct: 84 RSTMMHAAAWLLLQQLSPA----AARVARAAD--DDSSVQVSK-GSAAPNFTLR---DQD 133
Query: 270 FNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHL 449
+ LS F G+ VV++FYP D T C + AF D + F +VIG+S D SH
Sbjct: 134 GRAVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHK 193
Query: 450 AWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRG--LFIIDRNGTL 608
+ +K K+ LL+D ++ K++ V D L G +++D+NG +
Sbjct: 194 EF---KKK----YKLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVV 241
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 276 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 452
+++L DF G YV++F +P DFT VC TEL + A +F +++G S D SH
Sbjct: 21 KIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKD 80
Query: 453 WINTPRKDGGLGKMEIPLLADYKKQISKDYDVL 551
WI ++ P++AD ++ + +++
Sbjct: 81 WIKDIEAYKPGRRVGFPIVADPDREAIRQLNMI 113
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 342 FVCPTELIAFSDKAKDFAGIDCQVIGVSTDS 434
FV E+ AFSD+ ++F I+ +V+GVS DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 644 RSVDXTLRLVKAFQFA-DKXXKVCPAG 721
RSVD TLR ++A Q+ + +VCPAG
Sbjct: 107 RSVDETLRTLQALQYVQENPDEVCPAG 133
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 513 DYKKQISKDYDVLLDD-GFALRGLFIIDRNGTL 608
+++K ++ V +D G ALRGLFIID+ G +
Sbjct: 63 EFEKINTEVLGVSIDSVGIALRGLFIIDKEGVI 95
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 31.5 bits (68), Expect = 0.93
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Frame = +3
Query: 255 VVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCP-TELIA-FSDKAKDFAGIDCQVIGVST 428
+++ + +++ +SD GKYV L F + V T L+A F +K K+ G +V+ VS
Sbjct: 181 LLSNKGDRVPISDLEGKYVGLCFVVNGYGPVVQFTSLLAKFYEKLKE-VGEKFEVVAVSL 239
Query: 429 DSE-------FSHLAWINTPRKD 476
DS+ F+ + W+ P++D
Sbjct: 240 DSDEELSNESFAGMPWLAIPQED 262
>09_05_0015 -
20083143-20083308,20083645-20084017,20084362-20084675,
20085164-20085512,20085678-20085837,20086307-20086618,
20086700-20086820,20087225-20087277
Length = 615
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 516 YKKQISKDYDVLLDDGFALRGLFIIDRNGTLPSH---VGERSAR 638
Y++++ KD+ LLDD LF+I++ G + + +G+R AR
Sbjct: 43 YRRRVLKDFSKLLDDEIEKIVLFMIEQQGLIAARLEDLGKRRAR 86
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = +3
Query: 249 TAVVNGEFNQLK-------LSDFTGKYVVLFFYPLDFTFVCPTELIAFS---DKAKDFAG 398
TA + G FN L DF GK+ +L+F +CP EL + DK K+ A
Sbjct: 178 TAAIGGPFNLLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAIDKIKEKAK 237
Query: 399 IDCQVIGVSTDSE 437
++ + ++ D E
Sbjct: 238 MEVVPVFITVDPE 250
>06_03_0251 +
18715023-18715106,18715274-18715396,18715509-18715611,
18716061-18716134,18716208-18716288,18716370-18716522,
18717435-18717506,18718313-18718396
Length = 257
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 90 KSLLTHAKMSFI--VKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQ-KPAPDFSATAVV 260
++ +TH K F+ QL +VLS K+ ++ + K KP D SA+ +
Sbjct: 128 EAAVTHCKGHFVNPTNQLCANVLSTIHKLMSEVSDGNILEDKCVKAAPKPTIDVSASRAL 187
Query: 261 NGEFNQL 281
E+NQL
Sbjct: 188 LEEYNQL 194
>02_04_0585 -
24088344-24089366,24089833-24090075,24090305-24090655,
24090736-24090823,24091178-24091275,24091813-24092025,
24092150-24092245,24093124-24093195,24093909-24094067
Length = 780
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 646 LXGXXAPPGQGLPVRRQARKGXPGRLXPXPXADPIKPXP 762
L G P GL V G P L P P DPI P
Sbjct: 564 LVGSGGPLSHGLVVTPSQTTGPPKSLIPAPSVDPIVEQP 602
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 117 SFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQK 227
SF+ +++SRS S +V R+ FST +T A + K
Sbjct: 165 SFLEEEISRSPYSVIVEVGPRMTFSTAFSTNAVSICK 201
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 482 STVLPRSVDPCEVTELRVCGHSNHLTIDSSKVF-SFITERY---ELCRTYKC 339
S+ L S + C ++ +C NHL++ S +F S + + Y + C+++ C
Sbjct: 384 SSSLKESPESCSISAASLCEDHNHLSVLISNMFRSVVVDAYIYHKYCKSHIC 435
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 57 ELICLGFKYNPKS-LLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPA 233
+ + K +PK+ L H F+ +R LSP F +T AP + PA
Sbjct: 30 DAVRFALKMDPKTTFLAHGLADFVASAAARDALSPIFAKLAAAEPPPPPSTTAPIIAAPA 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,974,398
Number of Sequences: 37544
Number of extensions: 375991
Number of successful extensions: 929
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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