Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J02
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   1.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.1  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    24   7.1  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 560 ILIICFGSMLNNFFLTFIVDFGDSFGRRMGLFKILLVVKIGELSSFFCVKMGLLLI 393
           + I+ FG  L N  +T ++         +G  +I+ V  +  ++SFF V +G  +I
Sbjct: 399 LYIVVFGESLLNDAVTVVMYHMFEVYNEIGASEIIAVDIVSGIASFFVVALGGTII 454


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +1

Query: 316 TIIDCTEDQKRAKNIEKSPILCKKTRISKSPILTQKNDDNSPILTTRSILNSPI--LLPK 489
           TI  C  D K  +     P  C  TR+  + ++   +D N    T  ++    +  L+P 
Sbjct: 387 TIRCCVPDLKSLREFVSRPPACS-TRLHCT-MIRHDDDSNQSSGTCYTLYLEFLGGLVPL 444

Query: 490 LSPKSTMKVKKKLFSIDPK 546
           L  K T K++ +    DP+
Sbjct: 445 LKGKRTSKIRPEFVIFDPQ 463


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 447 NYQEYFEQPHSPTEAITKV 503
           N Q YF QP SP+   T V
Sbjct: 832 NSQHYFTQPFSPSGGTTPV 850


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 439 PILTTRSILNSPILLPKLSPKSTMKVKK 522
           P  T + + NSP   PK SPK + + +K
Sbjct: 253 PSETLKQLQNSPKGAPKSSPKQSPRQRK 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,929
Number of Sequences: 2352
Number of extensions: 11892
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)