Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_J01
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   6.2  

>Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical
           protein Y41E3.16 protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 398 PLPARWPIH*CRKNLPHLPPEPETXNGCN 312
           P PA W +    K   H  P P T NG N
Sbjct: 364 PKPANWQLEWAAKMAMHKKPAPATTNGVN 392


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +1

Query: 775 PSGKRXPFPIXXXXXVSPXXXXGPSXPXPGLVXPKPPXFXPXPXXP 912
           P+    P+P       +P     P  P P    P PP + P P  P
Sbjct: 110 PAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,363,930
Number of Sequences: 27780
Number of extensions: 180079
Number of successful extensions: 327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)