Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I23
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division c...    30   2.0  
U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division c...    30   2.0  
U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division c...    30   2.0  
AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14 phosph...    30   2.0  
AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14 phosph...    30   2.0  
AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14 phosph...    30   2.0  

>U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division
           cycle related protein14, isoform d protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 608 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 644


>U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division
           cycle related protein14, isoform e protein.
          Length = 707

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 622 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 658


>U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division
           cycle related protein14, isoform a protein.
          Length = 693

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 608 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 644


>AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14
           phosphatase isoform E protein.
          Length = 707

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 622 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 658


>AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14
           phosphatase isoform D protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 608 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 644


>AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14
           phosphatase isoform A protein.
          Length = 693

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 631 KSTLKSEVAKPDRTIKIPGVXPXESSLXALSCSRPXP 741
           K +L +E   P R + +PG     SSL  +  SRP P
Sbjct: 608 KCSLTAESKPPKRILSMPGTSKSTSSLKKIQVSRPRP 644


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,792,173
Number of Sequences: 27780
Number of extensions: 242387
Number of successful extensions: 420
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)