Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I17
         (1013 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0225 + 13257655-13260693                                         32   0.63 
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312...    30   3.4  

>06_02_0225 + 13257655-13260693
          Length = 1012

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 414 PRTACPXPTHVAFPKPPKAPGQCASNLPIHLYGNSNNTRLVN 289
           P T    P+  A P  P A G    +LP+  YG+S+++RLVN
Sbjct: 13  PPTPDNQPSGGAPPAAPSAGGARPGDLPLPPYGSSSSSRLVN 54


>02_03_0388 +
           18429538-18430598,18430971-18431081,18431165-18431237,
           18431513-18431695
          Length = 475

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 420 SRPRTACPXPTHVAFPKPPKAPGQCASNLP 331
           S P+ + P P H   P PP+AP       P
Sbjct: 82  SPPQASAPSPPHAPAPSPPQAPAMTPPQAP 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,639,903
Number of Sequences: 37544
Number of extensions: 315232
Number of successful extensions: 846
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)