Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I13
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0123 + 20334350-20334553,20335059-20335490,20336052-203361...    31   0.89 
05_04_0114 + 18090593-18092248                                         28   8.3  

>11_06_0123 +
           20334350-20334553,20335059-20335490,20336052-20336191,
           20336281-20336401,20337110-20337250,20337421-20337663
          Length = 426

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 191 VTRGKRRNFT---LXKRRNKYFLEPGFKGFFCTCNFRRKRLRQR 313
           V +G++R +       R+  Y L PG +GFF TC+  R+R   R
Sbjct: 17  VAKGRKRKYLPHGKPVRKGAYPLRPGVQGFFLTCDGGRERQATR 60


>05_04_0114 + 18090593-18092248
          Length = 551

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 315 VYNLLNEYASKLYPDLDVEQVPPSAVP 395
           V+N LN YA+ L+  L+    PP+AVP
Sbjct: 377 VWNALNYYAA-LFDALEASSTPPAAVP 402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,918
Number of Sequences: 37544
Number of extensions: 224281
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)