Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I13
         (858 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118476-1|AAM49845.1|  324|Drosophila melanogaster GM16085p pro...    44   4e-04
AE014296-830|AAF47886.2|  324|Drosophila melanogaster CG15014-PA...    44   4e-04

>AY118476-1|AAM49845.1|  324|Drosophila melanogaster GM16085p
           protein.
          Length = 324

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = +3

Query: 255 PASRASFARVTLEEKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVP 395
           P  R  FA   + EK CV+E YNLLN YA  LY     E  P    P
Sbjct: 33  PGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQP 79



 Score = 30.3 bits (65), Expect = 3.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
 Frame = +2

Query: 209 RNFTLXKRRNKYF------LEPGFKGFFCTCNFRRK 298
           +N      + KYF      L+PG +GFF TCN   K
Sbjct: 12  KNVKFNNNKKKYFHAKRQTLQPGQRGFFATCNINEK 47


>AE014296-830|AAF47886.2|  324|Drosophila melanogaster CG15014-PA
           protein.
          Length = 324

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = +3

Query: 255 PASRASFARVTLEEKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVP 395
           P  R  FA   + EK CV+E YNLLN YA  LY     E  P    P
Sbjct: 33  PGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQP 79



 Score = 30.3 bits (65), Expect = 3.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
 Frame = +2

Query: 209 RNFTLXKRRNKYF------LEPGFKGFFCTCNFRRK 298
           +N      + KYF      L+PG +GFF TCN   K
Sbjct: 12  KNVKFNNNKKKYFHAKRQTLQPGQRGFFATCNINEK 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,733,323
Number of Sequences: 53049
Number of extensions: 390880
Number of successful extensions: 720
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)