Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I12
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003...    31   1.2  
07_01_0565 + 4188387-4190570                                           30   2.8  
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133...    29   3.7  
11_06_0163 + 20821109-20821250,20827123-20827415,20828279-20830426     28   8.5  
03_06_0565 + 34747278-34748066,34748170-34748406,34749777-347498...    28   8.5  

>02_05_0046 - 25398412-25398594,25399022-25399060,25399896-25400360,
            25400758-25400816,25400920-25401748,25402554-25402898,
            25402973-25403435,25403537-25403640,25403692-25403901,
            25404933-25405088,25405774-25406052,25406237-25406986,
            25407141-25407232,25407977-25408361,25408672-25408752,
            25409196-25409354,25409399-25409506,25409604-25409666,
            25409764-25409835,25409932-25410366
          Length = 1758

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 403  HDTLHRHRRSPPEISSTTILQKSCLSPREILEVYGMENEPGVDYHKTENILGDVS 567
            H+ +     S P IS +TIL+ SC+  +  +  Y  + +  + Y ++   LG VS
Sbjct: 928  HEEVDEDTISSPRISRSTILRGSCMREKRFVWTYDSDRKLLMIYTRSRATLGAVS 982


>07_01_0565 + 4188387-4190570
          Length = 727

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 367 ALHRINGTFRPLHDTLHRHRR-SPPEISSTTILQKSCLSPREILEVYGMENEP 522
           A  R++   R L D LHRH+R  PP ++  T L++  ++P  + EV      P
Sbjct: 87  AARRLSPLARFLLDALHRHQRWGPPVVAELTKLRR--VAPELVAEVLSARPPP 137


>10_06_0085 +
           10511258-10512327,10512978-10513058,10513318-10513396,
           10514160-10514201
          Length = 423

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 361 DLALHRINGTFRPLHDTLHRHRRSPPEISSTTILQKSCL 477
           D +LHR   +   LH  L RH   PP  +S + L  S L
Sbjct: 128 DKSLHRARDSQLVLHLALQRHHHEPPAAASASELYASTL 166


>11_06_0163 + 20821109-20821250,20827123-20827415,20828279-20830426
          Length = 860

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
 Frame = +1

Query: 280 KGIITFEGFE-HLLASLGLGGRVFNSPHDLALHRINGTFRPLHDTLHRHRR 429
           K  +T   +  H L S  L       P  +A HR      P+H  LH H R
Sbjct: 500 KAYVTVNDYSWHQLVSHWLNTHAVMEPFAIATHRQLSVAHPIHKLLHPHYR 550


>03_06_0565 +
           34747278-34748066,34748170-34748406,34749777-34749869,
           34751752-34751988,34752398-34752584,34752956-34753028,
           34753145-34753289,34753670-34753779,34754127-34754258,
           34754328-34754469,34754545-34754679,34756278-34756435,
           34757327-34757401,34757505-34757643,34757838-34757952,
           34758016-34758107,34758500-34758613
          Length = 990

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 409 TLHRHRRSPPEISSTTILQKSCLSPREILE 498
           T +R RR P  I+  +I +K+ LSP+ +LE
Sbjct: 475 TRNRRRRLPNTITIDSIHEKNFLSPKSVLE 504


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,338,942
Number of Sequences: 37544
Number of extensions: 517737
Number of successful extensions: 1220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)