Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I12
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    25   2.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   9.2  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 338 DACSTHLMIWPCIASMEPLGHFTTPCTD 421
           DA   H+  +P   S +P+GHFT   +D
Sbjct: 163 DARPEHVRKYPSSYSGKPIGHFTQIASD 190


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 571 CRTHLQECFRSYGNQPRARFP 509
           CRT L  C + +  +PR   P
Sbjct: 72  CRTSLAPCSKLFAAEPRVALP 92


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 374  IASMEPLGHFTTPCTDTDALRQKLALQP 457
            IAS++P G    PC  ++    +L L P
Sbjct: 1083 IASVQPTGKGVCPCISSEHGENELELTP 1110


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -3

Query: 146 VNMVAT--ECPDRRWQPSASVQHYHTMYFVCP 57
           VN  AT   C  R+   +   +HY   YFV P
Sbjct: 15  VNCTATGRRCKQRKSPYTIDFEHYDKHYFVLP 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,130
Number of Sequences: 2352
Number of extensions: 18778
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)