Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_I11
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0111 + 5381779-5382117,5382775-5382798 52 8e-07
07_03_0548 + 19349943-19350290,19350372-19351100 48 7e-06
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120... 43 3e-04
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 32 0.52
03_03_0149 + 14843880-14844145,14846501-14846561,14846608-148467... 31 1.2
06_03_1032 + 27029698-27029785,27030640-27031275,27031739-270319... 29 4.9
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 29 4.9
07_01_1103 + 10141766-10143583 29 6.4
01_01_0994 - 7861310-7862119,7862378-7862498,7862718-7862901,786... 28 8.5
>10_02_0111 + 5381779-5382117,5382775-5382798
Length = 120
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 457 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 636
Q+ L P L+D IV +G TV E+GPG G +T+ +++ K +V +E DPR + L
Sbjct: 40 QHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLEL 99
>07_03_0548 + 19349943-19350290,19350372-19351100
Length = 358
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +1
Query: 430 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 609
+ R + Q+ L PR++D IVR + V EVGPG G +T ++ ++ +E
Sbjct: 34 RFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVE 93
Query: 610 KDPRFLPSLELLADACRDKVDVDIITGDILKTD 708
DPR + ++ DA + +I D ++ +
Sbjct: 94 IDPRMVDAVTARVDALGLAHKLTVIRADAVEAE 126
>02_01_0175 -
1198657-1198737,1199080-1199190,1199488-1199540,
1200131-1200215,1200519-1200614,1200729-1200821,
1201640-1201696,1201826-1201975,1202819-1202893
Length = 266
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +1
Query: 457 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 636
+N+++ ++ +++V A+G + V E+GPG G +T +++ A + +EKD
Sbjct: 25 ENYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTAALL-DAGATVFAVEKDKHM---A 80
Query: 637 ELLADACRDKVDVDIITGDILKTD-*VNLYRMMQKSLVGSPPPVHLIGNLPFSVSTILI 810
L+ D + II DI K + + +++ + ++ NLPF+VST ++
Sbjct: 81 TLVNDRFGSTEQLKIIEEDITKFNVRSHFLPFLEEKSHHTRKYAKVVSNLPFNVSTEVV 139
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 32.3 bits (70), Expect = 0.52
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 89 GRLRI*TENQRYSTRSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDGLHDRSRSVG 268
G L I +Q + ++Q G+N + EKS T ++ F + L D +RS+G
Sbjct: 455 GELNIHNADQIRNEDPTSQVGKNKTKR-GKAEKSVTLEELQKHF----SGSLKDAARSLG 509
Query: 269 C-LLVFYLRHQTGDVPXTISTSPRKI 343
V YL HQ DV I+T P K+
Sbjct: 510 AGYSVDYL-HQNPDVYAQINTQPLKV 534
>03_03_0149 +
14843880-14844145,14846501-14846561,14846608-14846720,
14848448-14848540,14849578-14849793,14853773-14856023
Length = 999
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 568 SIIRQAPKKLVLIEKD-PRFLPSLELLADACRDKVDVDIITGDILKTD*VNLYRMMQKSL 744
+I+ Q ++L K+ PR + E+LA A RDK + +I G++ +T+ N+ M+
Sbjct: 332 NILHQIVQQLTEDNKNCPRSMVH-EMLATALRDKKYLLVIDGEVSRTEWKNIITMLTTLA 390
Query: 745 VGS 753
VGS
Sbjct: 391 VGS 393
>06_03_1032 +
27029698-27029785,27030640-27031275,27031739-27031993,
27032451-27032605,27032704-27032783,27032891-27033026,
27033228-27033377,27033474-27033641
Length = 555
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 319 DFDEPPKNTAVIMAVAKTALQIRLPPLPSIKDVIKLYKLRALRE-LSQNFLMEPRLIDKI 495
D P+ A I+AVA + PS+K V++ L+ RE L + P+L+ +
Sbjct: 469 DVGYDPEEMAHILAVASMCIHHSSSSRPSMKSVVRF--LKGDRESLEMMQMQRPKLMKPL 526
Query: 496 VRASGNIQNHT 528
+ SG+ +++T
Sbjct: 527 MFDSGDSEDYT 537
>04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 29.1 bits (62), Expect = 4.9
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Frame = +1
Query: 355 MAVAKTALQIRLPPLPSIKDVIKL----YKLRALRELSQNFLMEPRLIDKIVRAS-GNIQ 519
M AK AL + L I++ ++ + EL + L +P ++ ++ + GN+
Sbjct: 718 MGNAKEALSTIINKLEDIQEAVEFVMEQHDDELWEELIRQCLQKPEMVGMLLEHTVGNLD 777
Query: 520 NHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSLELLADACRDKVDVDIITGDIL 699
+ V P G+ +R +LV I D R SL C D + V+I DIL
Sbjct: 778 PLYI--VSLVPDGLEIPRLRD---RLVKIVTDYRTETSLR---HGCNDILKVNIQEKDIL 829
Query: 700 KTD*VNL 720
K D VNL
Sbjct: 830 KADCVNL 836
>07_01_1103 + 10141766-10143583
Length = 605
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 719 KLT*SVFKISPVIMSTSTLSRQASAKSSNDGKNRGSFSIKTSFLGACLIIDRVIPPGPGP 540
+L S ++ V S R+ +S DG R + +++ L+ +RV+PP P P
Sbjct: 149 ELAASPIRLYRVRFSGHGKKRKREPQSGEDGVGRARAAPQSAGTETALLEERVMPPQPAP 208
Query: 539 TS 534
S
Sbjct: 209 QS 210
>01_01_0994 -
7861310-7862119,7862378-7862498,7862718-7862901,
7862975-7863070,7863428-7863476,7863555-7863596,
7863684-7863836,7865631-7865705,7866462-7866587
Length = 551
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -1
Query: 644 KSSNDGKNRGSFSIKTSFLGACLIIDRVIPPGPGPTSQT 528
KSS G GSF K+ G+ ID IP PGP S T
Sbjct: 377 KSSGQGGFFGSFFRKSLKKGSFHDIDPGIPTTPGPQSAT 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,381,573
Number of Sequences: 37544
Number of extensions: 427989
Number of successful extensions: 992
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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