Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I09
         (1168 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1071 - 8755157-8755510                                           32   1.0  
06_01_1072 - 8756386-8756706                                           30   3.1  
12_02_0046 + 12830974-12832386                                         29   9.3  

>06_01_1071 - 8755157-8755510
          Length = 117

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 291 VFGRVQGXXXRKYXXXQADXLGLRGWCXNTAQG 389
           V GRVQG   R +    A+ LGL GW  N   G
Sbjct: 32  VKGRVQGVGFRDWTAETAESLGLAGWVRNRRDG 64


>06_01_1072 - 8756386-8756706
          Length = 106

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 291 VFGRVQGXXXRKYXXXQADXLGLRGWCXNTAQG 389
           V GRVQG   R +    A  LGL GW  N   G
Sbjct: 21  VKGRVQGVFFRDWTVETARALGLAGWVRNRRDG 53


>12_02_0046 + 12830974-12832386
          Length = 470

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 19/79 (24%), Positives = 23/79 (29%)
 Frame = +1

Query: 835  PXXXXPXXRXXRAXAPSXXSLPRXTXSSXXFLXXXXPPAXXQPXSPVXXGXXRXAPSPRX 1014
            P    P  R   A       +P  T      L    PP    P +    G    +P+ R 
Sbjct: 243  PQPAPPSLRTAPAAVAPPRQVPVITQQQAPPLKRPAPPVPSPPCAKKIRGPVSASPAARQ 302

Query: 1015 XXXXXSRXPRXXXRPPPXP 1071
                 S  P     PPP P
Sbjct: 303  SCVAASAPPPWCVPPPPRP 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,476,791
Number of Sequences: 37544
Number of extensions: 169230
Number of successful extensions: 169
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)