Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_I02
         (947 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.3  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   7.1  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   7.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = +1

Query: 655 PXXEPQKXRAPQVXGGXXPXQXXXRXPGXFPPXXPP 762
           P  +P   ++PQ      P       P   PP  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 737 AXFPXEXLPSXPSPXXRPXP 796
           A F    LP+ P P  RP P
Sbjct: 16  AAFAYVPLPNVPQPGRRPFP 35


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 737 AXFPXEXLPSXPSPXXRPXP 796
           A F    LP+ P P  RP P
Sbjct: 2   AAFAYVPLPNVPQPGRRPFP 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,014
Number of Sequences: 438
Number of extensions: 2703
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)