Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H24
(1026 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 43 3e-04
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 43 3e-04
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 43 3e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.009
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.009
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.009
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.009
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.009
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.035
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.047
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 36 0.062
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 33 0.25
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 33 0.25
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.25
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.25
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.25
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 33 0.33
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.44
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.58
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.76
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.76
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.76
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.1
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 5.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 5.4
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 7.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 7.1
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 7.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 7.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 7.1
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXG--PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPX-FPPX 612
PPPP G G PP P SPP G P PPRG PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
GG PP T P P ++ + P + P
Sbjct: 316 QAGGSPPPAGTGSPPP--PPRQKRQAPERSPP 345
Score = 35.9 bits (79), Expect = 0.047
Identities = 36/129 (27%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Frame = +1
Query: 439 NPPPPX--GGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPX 612
+PPPP G G P P PP PP G P PP G PP
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTG-----SPPPPPTGSP----PPP 283
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPP 792
GG PP + P P + P T P G P QK P
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP--QAGGSPPPAGTGSPPPPPRQKRQAPE 341
Query: 793 XXXGGGXPP 819
G PP
Sbjct: 342 RSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXG--PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPX-FPPX 612
PPPP G G PP P SPP G P PPRG PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
GG PP T P P ++ + P + P
Sbjct: 337 QAGGSPPPAGTGSPPP--PPRQKRQAPERSPP 366
Score = 35.9 bits (79), Expect = 0.047
Identities = 36/129 (27%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Frame = +1
Query: 439 NPPPPX--GGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPX 612
+PPPP G G P P PP PP G P PP G PP
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTG-----SPPPPPTGSP----PPP 304
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPP 792
GG PP + P P + P T P G P QK P
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP--QAGGSPPPAGTGSPPPPPRQKRQAPE 362
Query: 793 XXXGGGXPP 819
G PP
Sbjct: 363 RSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXG--PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPX-FPPX 612
PPPP G G PP P SPP G P PPRG PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
GG PP T P P ++ + P + P
Sbjct: 322 QAGGSPPPAGTGSPPP--PPRQKRQAPERSPP 351
Score = 35.9 bits (79), Expect = 0.047
Identities = 36/129 (27%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Frame = +1
Query: 439 NPPPPX--GGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPX 612
+PPPP G G P P PP PP G P PP G PP
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTG-----SPPPPPTGSP----PPP 289
Query: 613 XXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPP 792
GG PP + P P + P T P G P QK P
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP--QAGGSPPPAGTGSPPPPPRQKRQAPE 347
Query: 793 XXXGGGXPP 819
G PP
Sbjct: 348 RSPPTGSPP 356
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Frame = +1
Query: 445 PPPXGGXAVFXFXG--PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXX 618
PPP G A + G PP P P PP G P PP P PP
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--- 301
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
PP +T P P P P + GP
Sbjct: 302 ---PPPGRTPGPPGM-PGMPPPPPPSRFGP 327
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/90 (27%), Positives = 29/90 (32%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG 621
PPPP + P P+ P + PP G P PP G PP G
Sbjct: 264 PPPPPSVTPM------PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPG 315
Query: 622 GXPPGXKTXFXPXRGPXKRXPKTPXKXGPG 711
PP + F P P P PG
Sbjct: 316 MPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Score = 31.5 bits (68), Expect = 1.0
Identities = 30/91 (32%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG 621
PPPP G + PP P PP + PP G G P P R F P G
Sbjct: 288 PPPPSSGM----WPPPPPP---PPGRTPGPP---GMPGMPPPPPPSR------FGPPGMG 331
Query: 622 GXPPGXKTXF-XPXRGPXKRXPKTPXKXGPG 711
G PP P P P+ P GPG
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPPPRYP-SAGPG 361
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +1
Query: 442 PPPPX--GGXAVFXFXGPPXP-VXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPX 612
PPPP G + PP P + P PP G P PP P PP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR--PPAPPS 376
Query: 613 XXGGXPP 633
G PP
Sbjct: 377 GHGMIPP 383
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = -3
Query: 622 PPXXXGGXPEXPX----PLG-GXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXP 458
PP G P P P G G PPP + PGG R P G PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 457 R 455
R
Sbjct: 370 R 370
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXS-PPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXX 618
PPPP G + PP P PP PP GG P PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP- 787
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
PPG P K P GP
Sbjct: 788 --PPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXX------PXPPRGXXXPXF 603
PPPP G + PP P P + PP GG P PP G P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 604 PPXXXGGXPPG 636
PP GG G
Sbjct: 773 PPPPPGGFKGG 783
Score = 33.9 bits (74), Expect = 0.19
Identities = 27/83 (32%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Frame = +1
Query: 484 GPPXPVXSPPXXSXXPPXXXGXG-----GXXXXPXPPRG----XXXPXFPPXXXGGXPPG 636
GPP P PP PP G G P PP G P PP GG PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 637 XKTXFXPXRGPXKRXPKTPXKXG 705
P G K P P G
Sbjct: 772 PP---PPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 636 PXGXPPXXXGGEXRXXPPPWGXGXXXXPPPPXXXRG 529
P G PP GG PPP G PPPP +G
Sbjct: 748 PGGLPPIS-GGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 619 PXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXP 458
P GG P P P G PP PGG GG P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1022 GGAPXPXXETXPGGXLXKXPPPSPXG 945
GG P P PGG PPP P G
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/111 (23%), Positives = 28/111 (25%)
Frame = +1
Query: 487 PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRG 666
P P+ P + P G P P PP G PP P G
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 667 PXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPPXXXGGGXPP 819
P P G G P PPP GG PP
Sbjct: 741 ----GPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -2
Query: 635 PGGXPPXFXGGKXGXXXPLGGXGKXXSPPXPXXXGGXXXFXGGEXTGXGGPXXXKTAXPP 456
P G PP GG P G PP P GG GG P PP
Sbjct: 716 PPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 455 XGGGGXFXXXXKTFPXLPPXXG 390
GG K P PP G
Sbjct: 775 PPPGG-----FKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXS-PPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXX 618
PPPP G + PP P PP PP GG P PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP- 787
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
PPG P K P GP
Sbjct: 788 --PPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXX------PXPPRGXXXPXF 603
PPPP G + PP P P + PP GG P PP G P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 604 PPXXXGGXPPG 636
PP GG G
Sbjct: 773 PPPPPGGFKGG 783
Score = 33.9 bits (74), Expect = 0.19
Identities = 27/83 (32%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Frame = +1
Query: 484 GPPXPVXSPPXXSXXPPXXXGXG-----GXXXXPXPPRG----XXXPXFPPXXXGGXPPG 636
GPP P PP PP G G P PP G P PP GG PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 637 XKTXFXPXRGPXKRXPKTPXKXG 705
P G K P P G
Sbjct: 772 PP---PPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 636 PXGXPPXXXGGEXRXXPPPWGXGXXXXPPPPXXXRG 529
P G PP GG PPP G PPPP +G
Sbjct: 748 PGGLPPIS-GGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 619 PXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXP 458
P GG P P P G PP PGG GG P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1022 GGAPXPXXETXPGGXLXKXPPPSPXG 945
GG P P PGG PPP P G
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/111 (23%), Positives = 28/111 (25%)
Frame = +1
Query: 487 PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRG 666
P P+ P + P G P P PP G PP P G
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 667 PXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPPXXXGGGXPP 819
P P G G P PPP GG PP
Sbjct: 741 ----GPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -2
Query: 635 PGGXPPXFXGGKXGXXXPLGGXGKXXSPPXPXXXGGXXXFXGGEXTGXGGPXXXKTAXPP 456
P G PP GG P G PP P GG GG P PP
Sbjct: 716 PPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 455 XGGGGXFXXXXKTFPXLPPXXG 390
GG K P PP G
Sbjct: 775 PPPGG-----FKGGPPPPPPPG 791
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Frame = +1
Query: 445 PPPXGGXAVFXFXG--PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXX 618
PPP G A + G PP P P PP G P PP P PP
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--- 311
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
PP +T P P P P + GP
Sbjct: 312 ---PPPGRTPGPPGM-PGMPPPPPPSRFGP 337
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/90 (27%), Positives = 29/90 (32%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG 621
PPPP + P P+ P + PP G P PP G PP G
Sbjct: 274 PPPPPSVTPM------PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPG 325
Query: 622 GXPPGXKTXFXPXRGPXKRXPKTPXKXGPG 711
PP + F P P P PG
Sbjct: 326 MPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Score = 31.5 bits (68), Expect = 1.0
Identities = 30/91 (32%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG 621
PPPP G + PP P PP + PP G G P P R F P G
Sbjct: 298 PPPPSSGM----WPPPPPP---PPGRTPGPP---GMPGMPPPPPPSR------FGPPGMG 341
Query: 622 GXPPGXKTXF-XPXRGPXKRXPKTPXKXGPG 711
G PP P P P+ P GPG
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPPPRYP-SAGPG 371
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +1
Query: 442 PPPPX--GGXAVFXFXGPPXP-VXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPX 612
PPPP G + PP P + P PP G P PP P PP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR--PPAPPS 386
Query: 613 XXGGXPP 633
G PP
Sbjct: 387 GHGMIPP 393
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = -3
Query: 622 PPXXXGGXPEXPX----PLG-GXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXP 458
PP G P P P G G PPP + PGG R P G PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 457 R 455
R
Sbjct: 380 R 380
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXS-PPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXX 618
PPPP G + PP P PP PP GG P PP PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP- 370
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP 708
PPG P K P GP
Sbjct: 371 --PPPGMFAPMAPVIPDYLPPKKVPKVDGP 398
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXX------PXPPRGXXXPXF 603
PPPP G + PP P P + PP GG P PP G P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 604 PPXXXGGXPPG 636
PP GG G
Sbjct: 356 PPPPPGGFKGG 366
Score = 33.9 bits (74), Expect = 0.19
Identities = 27/83 (32%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Frame = +1
Query: 484 GPPXPVXSPPXXSXXPPXXXGXG-----GXXXXPXPPRG----XXXPXFPPXXXGGXPPG 636
GPP P PP PP G G P PP G P PP GG PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 637 XKTXFXPXRGPXKRXPKTPXKXG 705
P G K P P G
Sbjct: 355 PP---PPPPGGFKGGPPPPPPPG 374
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 636 PXGXPPXXXGGEXRXXPPPWGXGXXXXPPPPXXXRG 529
P G PP GG PPP G PPPP +G
Sbjct: 331 PGGLPPIS-GGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 619 PXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXP 458
P GG P P P G PP PGG GG P PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 1022 GGAPXPXXETXPGGXLXKXPPPSPXG 945
GG P P PGG PPP P G
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/111 (23%), Positives = 28/111 (25%)
Frame = +1
Query: 487 PPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRG 666
P P+ P + P G P P PP G PP P G
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
Query: 667 PXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPPXXXGGGXPP 819
P P G G P PPP GG PP
Sbjct: 324 ----GPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -2
Query: 635 PGGXPPXFXGGKXGXXXPLGGXGKXXSPPXPXXXGGXXXFXGGEXTGXGGPXXXKTAXPP 456
P G PP GG P G PP P GG GG P PP
Sbjct: 299 PPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 455 XGGGGXFXXXXKTFPXLPPXXG 390
GG K P PP G
Sbjct: 358 PPPGG-----FKGGPPPPPPPG 374
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.035
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXP---XPPRGXXXP-XFPP 609
PP + F GPP PV S P PP G P P+G P + P
Sbjct: 352 PPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGP 411
Query: 610 XXXGGXPPGXKTXFXPXR-GPXKRXPKTPXKXGPG 711
GG PG + P + GP P P GPG
Sbjct: 412 PPPGG--PGAPGSYGPPQGGPGGFGP--PPPGGPG 442
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -1
Query: 669 GAPXGXKXGFXPXGXPPXXXGGEXRXXPPPWGXGXXXXPPP 547
G P G GF P PP GG PPP G PPP
Sbjct: 424 GPPQGGPGGFGPP--PP---GGPGAYGPPPTGFPPVGAPPP 459
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.9 bits (79), Expect = 0.047
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 496 PVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPP 633
P P PP G G P PPRG PP GG PP
Sbjct: 1549 PQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPP 1594
Score = 30.7 bits (66), Expect = 1.8
Identities = 34/122 (27%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Frame = +2
Query: 485 GPPSRXPPP------QXXPXAPRXFXGGGGXXFXPXPQGGGXFRXSPPXXXGGXPXGXKP 646
GPP R PP + P PR P P GG PP G G P
Sbjct: 1450 GPPMRGMPPLGMMRGRGGPPPPRGM--NSPMRGMPPPMRGG----GPPMRGGPPMRGGPP 1503
Query: 647 FFXPXGAPXKGXXKPXXKXXPXXGXGFFPKRAXXXXXGXXXXKKXXP--XPXXXGGAXPP 820
F G P G P G FP+R G P GG PP
Sbjct: 1504 MFR-GGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPP 1562
Query: 821 AG 826
G
Sbjct: 1563 HG 1564
Score = 30.7 bits (66), Expect = 1.8
Identities = 32/131 (24%), Positives = 36/131 (27%), Gaps = 4/131 (3%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXF-PPXXX 618
PPPP G + PP PP P P P RG P
Sbjct: 1468 PPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMR 1527
Query: 619 GGXPPGXKTXFXPXRGPXKRXPKTPXKXGP---GFXXGFFSQKGXXXXXXXXPXQKXXPP 789
GG P + P GP + +P GP G G
Sbjct: 1528 GGFP---QRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQG 1584
Query: 790 PXXXGGGXPPR 822
P GG PPR
Sbjct: 1585 PPPLMGGPPPR 1595
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGG 624
PPP GG + + G P P PP G PPR P PP GG
Sbjct: 1560 PPPHGG--MNGWRGGPPPPRGGSHCQGPPPLMGGP--------PPRLGMPPPGPPPPNGG 1609
Query: 625 XPP 633
PP
Sbjct: 1610 PPP 1612
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 35.5 bits (78), Expect = 0.062
Identities = 33/104 (31%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFP--PXX 615
PP P G V GPP P P P P P G P P
Sbjct: 153 PPGPDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPRGTRH 212
Query: 616 XGGXP--PGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKG 741
G P PG P GP K P TP K G GF Q G
Sbjct: 213 SAGVPGKPGDVGPCGP-EGP-KGAPGTPGKNGAPGDRGFGGQPG 254
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.5 bits (73), Expect = 0.25
Identities = 31/127 (24%), Positives = 34/127 (26%)
Frame = +1
Query: 361 PXXLPSXXXFPXXGGRXGKVFXXL*XNPPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXX 540
P P P G G+ P P G G P P P + P
Sbjct: 152 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 211
Query: 541 XGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXX 720
G G PP P P PPG K P P P GP
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP--PGPPGPA 269
Query: 721 GFFSQKG 741
G +KG
Sbjct: 270 GTPGEKG 276
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.5 bits (73), Expect = 0.25
Identities = 31/127 (24%), Positives = 34/127 (26%)
Frame = +1
Query: 361 PXXLPSXXXFPXXGGRXGKVFXXL*XNPPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXX 540
P P P G G+ P P G G P P P + P
Sbjct: 152 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 211
Query: 541 XGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXX 720
G G PP P P PPG K P P P GP
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP--PGPPGPA 269
Query: 721 GFFSQKG 741
G +KG
Sbjct: 270 GTPGEKG 276
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPP 534
PPPP GG A G P P PP + PP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 248
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPP 534
PPPP GG A G P P PP + PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 234
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPP 534
PPPP GG A G P P PP + PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 234
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.1 bits (72), Expect = 0.33
Identities = 31/127 (24%), Positives = 34/127 (26%)
Frame = +1
Query: 361 PXXLPSXXXFPXXGGRXGKVFXXL*XNPPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXX 540
P P P G G+ P P G G P P P + P
Sbjct: 157 PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLT 216
Query: 541 XGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXX 720
G G PP P P PPG K P P P GP
Sbjct: 217 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGP--PGPPGPA 274
Query: 721 GFFSQKG 741
G +KG
Sbjct: 275 GTPGEKG 281
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 33.1 bits (72), Expect = 0.33
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 624 PPXXXGGEXRXXPPPWGXGXXXXPPPPXXXRG 529
PP G R PPPWG PPPP RG
Sbjct: 109 PPWMRGPWWRRPPPPWGP-PPPGPPPPFGWRG 139
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.44
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +1
Query: 442 PPPPXGGXAV-FXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXX--PXPPRGXXXPXFPPX 612
PPPP G + F PP P+ + PP G G P PPRG PP
Sbjct: 726 PPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
Query: 613 XXGGXPPG 636
G G
Sbjct: 786 SFRGGRGG 793
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXP---PRGXXXPXFPPX 612
PPPP G A PP P P G GG P P RG P F P
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPFRPE 815
Query: 613 XXGG 624
G
Sbjct: 816 NGRG 819
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -1
Query: 699 FXXGFXXPFXGAPXGXKXGFXPXGXPPXXXGGEXRXXPPPW--GXGXXXXPPPPXXXRGA 526
F GF P G G PP G PP + G G PPPP R
Sbjct: 747 FQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRG 806
Query: 525 XG 520
G
Sbjct: 807 GG 808
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.58
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 631 GVXPPXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXG-XXLGGRXPG 494
G+ PP G P P P G PP K P LGG+ PG
Sbjct: 103 GIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKLGGKNPG 149
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +1
Query: 478 FXGPPXP---VXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTX 648
F PP P + PP PP G P P G P PP G PP
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP--PPPMFGAPPPPPPPS 121
Query: 649 FXPXRGPXKRXPKTP 693
P PKTP
Sbjct: 122 GLGV-APQPPRPKTP 135
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.76
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +1
Query: 487 PPXPVXS----PPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFX 654
PP P+ P S P G P PPRG P PP PPG
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRG--GPGAPPPPGMRPPPG-----A 801
Query: 655 PXRGPXKRXPKTPXKXGPG 711
P G P P + GPG
Sbjct: 802 PGGGGGMYPPLIPTRPGPG 820
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.76
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Frame = +1
Query: 487 PPXPVXS----PPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFX 654
PP P+ P S P G P PPRG P PP PPG
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRG--GPGAPPPPGMRPPPG-----A 801
Query: 655 PXRGPXKRXPKTPXKXGPG 711
P G P P + GPG
Sbjct: 802 PGGGGGMYPPLIPTRPGPG 820
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.76
Identities = 47/189 (24%), Positives = 53/189 (28%), Gaps = 9/189 (4%)
Frame = +1
Query: 487 PPXPVXS---PPXXSXXPPXXXGXGGXXXXPXPP-RGXXXPXFPPXXXGGXPPGXKTXFX 654
PP P + PP + P G G P PP +G P PP PP +
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP--PP------PPTGEPQDL 148
Query: 655 PXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPXQKXXPPPXXXGGGXPPRXXLX 834
G R P P K G G G PPP G G PP
Sbjct: 149 SGEGNASRRPPPPPK-GTGSPPP--PPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205
Query: 835 KXSXGXFXXXXXXXXXXXXXFPXPXPXXXEXXXPXXPPXGE-----GGGXFXKXPPGXVS 999
+ P P P PP GE G G + PP
Sbjct: 206 EPQ---------DLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPK 256
Query: 1000 XXGXGAPPP 1026
G PPP
Sbjct: 257 GTGSPPPPP 265
Score = 30.3 bits (65), Expect = 2.3
Identities = 38/136 (27%), Positives = 40/136 (29%), Gaps = 10/136 (7%)
Frame = +1
Query: 442 PPPPXG--------GXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXX--PXPPRGXX 591
PPPP G G A PP SPP P G P PP+G
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTG 197
Query: 592 XPXFPPXXXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPX 771
P PP PP + G R P P K G G G
Sbjct: 198 TP--PP------PPTGEPQDLSAEGYASRRPPPPPK-GTGSPTP--PPTGEPQDLSGEGN 246
Query: 772 QKXXPPPXXXGGGXPP 819
PPP G G PP
Sbjct: 247 ASRRPPPPPKGTGSPP 262
Score = 29.1 bits (62), Expect = 5.4
Identities = 37/136 (27%), Positives = 40/136 (29%), Gaps = 10/136 (7%)
Frame = +1
Query: 442 PPPPXGGXAVFXFXG------PPXPVXS---PPXXSXXPPXXXGXG-GXXXXPXPPRGXX 591
PPPP G G PP P + PP + P G P PP+G
Sbjct: 169 PPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTG 228
Query: 592 XPXFPPXXXGGXPPGXKTXFXPXRGPXKRXPKTPXKXGPGFXXGFFSQKGXXXXXXXXPX 771
P PP G P G R P P K G G G
Sbjct: 229 SPTPPPT---GEPQDLS-----GEGNASRRPPPPPK-GTGSPPP--PPTGEPQDLSGEGN 277
Query: 772 QKXXPPPXXXGGGXPP 819
PPP G G PP
Sbjct: 278 ASRRPPPPPKGTGTPP 293
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +1
Query: 484 GPPXPVXSPPXXSXXP--PXXXGXGGXXXXPXP--PRGXXXPXFPPXXXGGXPPGXKTXF 651
GPP P P P P G P P P G P PP PPG T
Sbjct: 208 GPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRR 267
Query: 652 XP-XRGPXKRXP 684
P GP R P
Sbjct: 268 PPGPPGPPTRRP 279
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.3
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = -2
Query: 665 PLXGQKXVFXPGGXPPXFXGGKXGXXXPLGGXGKXXSPPXPXXXGGXXXFXGGEXTGXGG 486
P G F P G PP GG G P G PP P G G G
Sbjct: 447 PSGGPPGPFNPSGAPPS--GGPPGPFNPSGAPPSG-GPPGPFDPSGAPPSGGPP-----G 498
Query: 485 PXXXKTAXPPXGGGGXFXXXXKTFPXLPP 399
P A P G G F +PP
Sbjct: 499 PFNPSGAPPSGGPPGPFDPSGAPPSGMPP 527
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = -2
Query: 665 PLXGQKXVFXPGGXPPXFXGGKXGXXXPLGGXGKXXSPPXPXXXGGXXXFXGGEXTGXGG 486
P G +F P G PP GG G P G +PP G G G
Sbjct: 162 PSGGPPGLFDPSGAPPS--GGPPGPFGPSG------APPSGGPPGPFNPSEAPPSGGPTG 213
Query: 485 PXXXKTAXPPXGGGGXF 435
P A P G G F
Sbjct: 214 PFDPSGAPPSGGPPGPF 230
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/75 (34%), Positives = 27/75 (36%)
Frame = +2
Query: 446 PXPPGXXRFFXXXGPPSRXPPPQXXPXAPRXFXGGGGXXFXPXPQGGGXFRXSPPXXXGG 625
P PPG GPP + PP Q P P G G P PQG S G
Sbjct: 134 PGPPGRDGALLP-GPPPK-PPCQKCPPGPPGPAGPPGPKGLPGPQGDAG--TSGQDGVPG 189
Query: 626 XPXGXKPFFXPXGAP 670
P P P GAP
Sbjct: 190 LPGPPGP-SGPQGAP 203
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 8/76 (10%)
Frame = +1
Query: 439 NPPPPXGGXAVFXFXGPPXPVXSPPXXSXXP--PXXXGXGG-----XXXXPXPPRGXXXP 597
NPP G GPP P PP P P G G P PP
Sbjct: 96 NPPSSAAGSCCTCQVGPPGP-PGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQ 154
Query: 598 XFPPXXXG-GXPPGXK 642
PP G PPG K
Sbjct: 155 KCPPGPPGPAGPPGPK 170
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -3
Query: 622 PPXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXPRXXG 446
PP GG E P G PP R PG G G PG P P G
Sbjct: 155 PPGPPGGPGELGGP-GRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPG 212
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -3
Query: 622 PPXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXGXXLGGRXPGXGAXXXKKPPXPRXXG 446
PP GG E P G PP R PG G G PG P P G
Sbjct: 155 PPGPPGGPGELGGP-GRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPG 212
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 4.1
Identities = 31/114 (27%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 298 GKLGRPXPXX-EPLXPXKKQXNPXXLPSXXXFPXXGGRXGKVFXXL*XNPPPPXGGXAVF 474
G GRP EPL P + P P P G G + P P G
Sbjct: 119 GNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNK 178
Query: 475 XFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPG 636
GPP P P PP G G P P P P PG
Sbjct: 179 GPAGPPGPGGKP--GPAGPPGENGNNG-EPQPGAPGEPGQPGQPGQRGPAGEPG 229
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPP 609
PPP G F P P+ PP PP G G PP P PP
Sbjct: 83 PPPGMGPPPFM----PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGP--PP 131
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPP 609
PPP G F P P+ PP PP G G PP P PP
Sbjct: 106 PPPGMGPPPFM----PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGP--PP 154
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPP 609
PPP G F P P+ PP PP G G PP P PP
Sbjct: 356 PPPGMGPPPFM----PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGP--PP 404
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG- 621
PP GPP P P PP G P P G P PP G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPG--PRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGE 259
Query: 622 GXPPG 636
PPG
Sbjct: 260 PGPPG 264
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +1
Query: 445 PPPXGGXAVFXFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXG- 621
PP GPP P P PP G P P G P PP G
Sbjct: 202 PPGDDSIGGTGIKGPPGPPG--PRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGE 259
Query: 622 GXPPG 636
PPG
Sbjct: 260 PGPPG 264
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -1
Query: 636 PXGXPPXXXG-GEXRXXPPPWGXGXXXXPPPP 544
P G PP G G PPP G PPPP
Sbjct: 36 PYGAPPPPVGAGVGYAPPPPRPYGATYAPPPP 67
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +1
Query: 784 PPPXXXGGGXPPRXXLXKXSXGXFXXXXXXXXXXXXXFPXPXPXXXEXXXPXXPPXGEGG 963
PPP GG P F P P PP GG
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 160
Query: 964 GXFXKXPPGXVSXXGXGAPP 1023
G + PPG G G PP
Sbjct: 161 GGDPRGPPG-----GMGGPP 175
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +1
Query: 784 PPPXXXGGGXPPRXXLXKXSXGXFXXXXXXXXXXXXXFPXPXPXXXEXXXPXXPPXGEGG 963
PPP GG P F P P PP GG
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 440
Query: 964 GXFXKXPPGXVSXXGXGAPP 1023
G + PPG G G PP
Sbjct: 441 GGDPRGPPG-----GMGGPP 455
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = -3
Query: 667 GPXGXKKXFXSXGVXPPXXXGGXPEXPXPLGGXXKXXPPPXRKXPGGXG--XXLGGRXPG 494
GP G + G P G P P P GG P PG G + G+
Sbjct: 181 GPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGP 240
Query: 493 XGAXXXKKPPXP 458
G PP P
Sbjct: 241 PGPPGPAGPPGP 252
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 9.4
Identities = 30/114 (26%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +1
Query: 298 GKLGRPXPXX-EPLXPXKKQXNPXXLPSXXXFPXXGGRXGKVFXXL*XNPPPPXGGXAVF 474
G GRP EP+ P + P P P G G + P P G
Sbjct: 117 GNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNK 176
Query: 475 XFXGPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPG 636
GPP P P PP G G P P P P PG
Sbjct: 177 GPAGPPGPGGKP--GPAGPPGENGRNG-EPQPGSPGEPGRPGQPGSRGPAGQPG 227
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/70 (25%), Positives = 21/70 (30%)
Frame = +1
Query: 484 GPPXPVXSPPXXSXXPPXXXGXGGXXXXPXPPRGXXXPXFPPXXXGGXPPGXKTXFXPXR 663
GPP P PP P G G P PP G P ++
Sbjct: 201 GPPGPA-GPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAG 259
Query: 664 GPXKRXPKTP 693
GP + P P
Sbjct: 260 GPGPKGPPGP 269
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -2
Query: 623 PPXFXGGK-XGXXXPLGGXGKXXSPPXP--XXXGGXXXFXGGEXTGXGGPXXXKTAXPPX 453
PP GG G GG G PP P GG GG G GG
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGC 110
Query: 452 GGGG 441
GGGG
Sbjct: 111 GGGG 114
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -2
Query: 623 PPXFXGGK-XGXXXPLGGXGKXXSPPXP--XXXGGXXXFXGGEXTGXGGPXXXKTAXPPX 453
PP GG G GG G PP P GG GG G GG
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGC 110
Query: 452 GGGG 441
GGGG
Sbjct: 111 GGGG 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,637,144
Number of Sequences: 27780
Number of extensions: 331305
Number of successful extensions: 1692
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2709719642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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