Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H21
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574...    29   4.9  
03_06_0368 - 33418918-33419031,33419132-33419530,33419680-334198...    28   8.6  

>09_02_0203 -
           5746068-5746307,5746469-5746729,5746833-5748239,
           5748588-5748714,5748800-5749119,5749202-5749963,
           5750749-5750898,5751007-5751096,5751196-5751340,
           5751440-5751617,5751753-5752448,5752555-5752753
          Length = 1524

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 316 GEWGYPSVSLLPCATPWRYP 375
           GE G+PS+ + PC+TP+  P
Sbjct: 29  GEIGWPSMEISPCSTPYGTP 48


>03_06_0368 -
           33418918-33419031,33419132-33419530,33419680-33419805,
           33419880-33420096,33420178-33420272,33420840-33421060,
           33421149-33421222,33421362-33421484,33421814-33421854,
           33421933-33422134,33422245-33422504,33422669-33422798,
           33423037-33423317
          Length = 760

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +1

Query: 553 RIQHPASSALPXMVPHSVTLGEGRSHSGPPXFIYTXRSRGRQDHVGKL 696
           R +HP   AL  +V +SV  G  R+  GPP + +  +   +Q ++G+L
Sbjct: 60  RPEHP--HALHQLVYYSVYAGWDRAARGPPPYWFPSQIDTKQTNLGRL 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,532,311
Number of Sequences: 37544
Number of extensions: 498493
Number of successful extensions: 1135
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)