Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H20
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0305 - 24276985-24277041,24277131-24277252,24277382-242776...   117   1e-26
08_02_1417 - 26922775-26922986,26923102-26923291,26923816-269239...    40   0.003
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369...    29   3.7  
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391...    29   6.5  
07_01_1025 + 8861153-8861376,8861929-8863027                           29   6.5  
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700...    28   8.6  

>04_04_0305 -
           24276985-24277041,24277131-24277252,24277382-24277606,
           24277725-24277913,24278143-24278215
          Length = 221

 Score =  117 bits (281), Expect = 1e-26
 Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 16/168 (9%)
 Frame = +1

Query: 187 TKNCITLRGSAQIICEYLKFSI--------------NSVLFQRGLYPPETFKAENQYGIT 324
           +K+ ITLRGSA I+ E+    +               S+L+ RG+YP E+F    +YG+T
Sbjct: 7   SKDIITLRGSAAIVSEFFDSGLISDPGCFVFLVCAWRSILYNRGVYPEESFTKVKKYGLT 66

Query: 325 LLLSEDPQIKSFLTNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQY--EDGD 498
           +LL++D  +K+F+ NL TQ  EW+   K++++ L+I++ A  EVLE W+F+IQ   E  D
Sbjct: 67  MLLTQDEGVKTFIANLNTQLSEWLEAGKLQRIVLVIMSKATSEVLERWNFSIQTDPEVVD 126

Query: 499 TALSKEKNEMVGSKDLKKIHREIRDVMLQVAATISYLPLLDCRCXFDV 642
             + KEK++       K+I REI+ +M QVA+ I+YLP LD  C FDV
Sbjct: 127 KGVIKEKSD-------KEIMREIQAIMRQVASCITYLPCLDEPCIFDV 167


>08_02_1417 -
           26922775-26922986,26923102-26923291,26923816-26923928,
           26924032-26924112,26925329-26926661
          Length = 642

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/80 (22%), Positives = 43/80 (53%)
 Frame = +1

Query: 217 AQIICEYLKFSINSVLFQRGLYPPETFKAENQYGITLLLSEDPQIKSFLTNLLTQSEEWI 396
           AQ+I ++L+ +++ V+F +G YPP  F+      + +  +  PQ+  ++ +  +    +I
Sbjct: 448 AQVIVDFLEVAVSCVVFLKGFYPPRAFERRRYMNVVVQKAVHPQLAGYIHSATSGLLPFI 507

Query: 397 LDKKVKKLSLIILNVANKEV 456
               V+++ +I  + A+  V
Sbjct: 508 QKGLVERVVVIFYDKAHVPV 527


>02_01_0509 +
           3694689-3695683,3695799-3695946,3696864-3696943,
           3697214-3698062,3698193-3698337,3698426-3698677,
           3698780-3699089,3699415-3699524
          Length = 962

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = +1

Query: 385 EEWILDKKVKKLSLIILNVANKEVL 459
           EE I+++++KKL+L++LN  NK+ L
Sbjct: 825 EEKIVEERLKKLALMLLNSGNKKFL 849


>11_08_0035 -
           27838495-27838655,27838750-27838897,27838987-27839192,
           27839291-27839972,27840074-27840247,27840963-27841181,
           27841281-27841400,27841540-27841680,27841762-27841801,
           27841969-27842129,27842506-27842589,27842659-27842721,
           27842808-27842885,27842980-27842984,27843228-27843313,
           27843354-27843544,27844089-27844166,27844255-27844365,
           27844757-27844927,27845026-27845198,27845748-27845928
          Length = 1090

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 454 VLECWDFNIQYEDG-DTALSKEKNEMVGSKDLKKIHREIRDVML 582
           +LE  DFN QYEDG  T L   K  ++    L   HR+  D +L
Sbjct: 261 ILESLDFNSQYEDGATTRLKTAKRCLIILCTLVTRHRKHADEIL 304


>07_01_1025 + 8861153-8861376,8861929-8863027
          Length = 440

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 499 TALSKEKNEMVGSKDLKKIHREIRDVMLQVAA 594
           TA ++ +    G K+L+ + REIRDV+  VAA
Sbjct: 332 TACTRMEPYREGEKELEWVFREIRDVVYDVAA 363


>02_04_0513 -
           23569212-23569675,23569759-23569801,23569888-23570000,
           23570099-23570158,23570472-23570541,23570887-23570951,
           23571548-23571685,23571764-23573015
          Length = 734

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 283 PPETFKAENQYGITLL-LSEDPQIKSFLTNLLTQ 381
           P  TF+ +  +G  L  LSEDP++ S + +LL Q
Sbjct: 314 PKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQ 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,554,646
Number of Sequences: 37544
Number of extensions: 296441
Number of successful extensions: 548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)