Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H20
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein. 134 1e-31
AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast m... 134 1e-31
AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast m... 105 6e-23
AC024880-6|AAF60912.1| 547|Caenorhabditis elegans Hypothetical ... 32 0.62
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 31 1.4
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 31 1.4
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 29 3.3
U00033-14|AAY44014.1| 215|Caenorhabditis elegans Hypothetical p... 29 3.3
Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 7.7
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 7.7
>AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein.
Length = 203
Score = 134 bits (323), Expect = 1e-31
Identities = 63/153 (41%), Positives = 105/153 (68%)
Frame = +1
Query: 184 QTKNCITLRGSAQIICEYLKFSINSVLFQRGLYPPETFKAENQYGITLLLSEDPQIKSFL 363
+T+N I+L+GSAQ++ E+ F +NS+L+QR LYP ++FK E +YG+TL ++ + ++++F+
Sbjct: 5 KTQNAISLKGSAQLVKEFFHFGLNSILYQRALYPSDSFKREKKYGLTLWVAHEKKLQAFM 64
Query: 364 TNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQYEDGDTALSKEKNEMVGSKD 543
LL Q E W+ +++K+L ++I V KEV+E W F+I E+ L++E K+
Sbjct: 65 DPLLQQVEYWLAKRQLKRLVMVISEVKTKEVVERWQFDIHTEN----LAEEGENAHRVKE 120
Query: 544 LKKIHREIRDVMLQVAATISYLPLLDCRCXFDV 642
KKI +EI DV+ Q+ A++S+LPLL+ FDV
Sbjct: 121 EKKIRQEISDVIRQITASVSFLPLLEEPVSFDV 153
>AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform a
protein.
Length = 203
Score = 134 bits (323), Expect = 1e-31
Identities = 63/153 (41%), Positives = 105/153 (68%)
Frame = +1
Query: 184 QTKNCITLRGSAQIICEYLKFSINSVLFQRGLYPPETFKAENQYGITLLLSEDPQIKSFL 363
+T+N I+L+GSAQ++ E+ F +NS+L+QR LYP ++FK E +YG+TL ++ + ++++F+
Sbjct: 5 KTQNAISLKGSAQLVKEFFHFGLNSILYQRALYPSDSFKREKKYGLTLWVAHEKKLQAFM 64
Query: 364 TNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQYEDGDTALSKEKNEMVGSKD 543
LL Q E W+ +++K+L ++I V KEV+E W F+I E+ L++E K+
Sbjct: 65 DPLLQQVEYWLAKRQLKRLVMVISEVKTKEVVERWQFDIHTEN----LAEEGENAHRVKE 120
Query: 544 LKKIHREIRDVMLQVAATISYLPLLDCRCXFDV 642
KKI +EI DV+ Q+ A++S+LPLL+ FDV
Sbjct: 121 EKKIRQEISDVIRQITASVSFLPLLEEPVSFDV 153
>AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform b
protein.
Length = 116
Score = 105 bits (251), Expect = 6e-23
Identities = 43/103 (41%), Positives = 75/103 (72%)
Frame = +1
Query: 184 QTKNCITLRGSAQIICEYLKFSINSVLFQRGLYPPETFKAENQYGITLLLSEDPQIKSFL 363
+T+N I+L+GSAQ++ E+ F +NS+L+QR LYP ++FK E +YG+TL ++ + ++++F+
Sbjct: 5 KTQNAISLKGSAQLVKEFFHFGLNSILYQRALYPSDSFKREKKYGLTLWVAHEKKLQAFM 64
Query: 364 TNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQYED 492
LL Q E W+ +++K+L ++I V KEV+E W F+I E+
Sbjct: 65 DPLLQQVEYWLAKRQLKRLVMVISEVKTKEVVERWQFDIHTEN 107
>AC024880-6|AAF60912.1| 547|Caenorhabditis elegans Hypothetical
protein Y97E10AR.4 protein.
Length = 547
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 460 ECWDFNIQYEDGDTALSKEKNEMVGSKDLKKIHREIRDVMLQV 588
EC N++YED D LS N S D+K+I + D++L++
Sbjct: 494 ECASVNVKYEDNDVKLSLVSNGDDNS-DVKEIEDLVEDLILKI 535
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 277 LYPPETFKAENQYGITLLLSEDPQIKSFLTNLLTQSEEWILDK-KVKKLSLIILNVANKE 453
++P + A+N +++++S + LL +S W++ K K+++ +++ + +
Sbjct: 225 IFPYIAYLAQNWRTLSVVISATSVLSFLALMLLEESPRWLVQKGKLEEARRLLIKIRKTD 284
Query: 454 VLECWDFNIQYEDGDTALSKE-KNEMVGSKDLKK 552
L DF +D D L E + +++ SK KK
Sbjct: 285 GLYTSDFE---KDLDEVLKIEAEKQVISSKKSKK 315
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 277 LYPPETFKAENQYGITLLLSEDPQIKSFLTNLLTQSEEWILDK-KVKKLSLIILNVANKE 453
++P + A+N +++++S + LL +S W++ K K+++ +++ + +
Sbjct: 225 IFPYIAYLAQNWRTLSVVISATSVLSFLALMLLEESPRWLVQKGKLEEARRLLIKIRKTD 284
Query: 454 VLECWDFNIQYEDGDTALSKE-KNEMVGSKDLKK 552
L DF +D D L E + +++ SK KK
Sbjct: 285 GLYTSDFE---KDLDEVLKIEAEKQVISSKKSKK 315
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 32 GILKXLTYITARLYQIVPTYSSVYINSLILIIDRTITAI*STNS*QLCHYNKQKIVLLCA 211
GI+ ++ + ++ V + S++I + ++II T+T I +T Y KQ + +
Sbjct: 473 GIIALTVLVSGQKFKAV--FKSIFITATLVIIGWTVTCISNTFVVLFVLYGKQIVNMYAG 530
Query: 212 APLKL--YANI*NFQ*IQYCFNEAYIHLKPLRQKTSMASHCYSQR 340
P+ + +NI F I + + P + T + H + +R
Sbjct: 531 IPVNIACASNIFVFYRINLDYRSGIRKIFPCKTTTVGSIHVHIER 575
>U00033-14|AAY44014.1| 215|Caenorhabditis elegans Hypothetical
protein F37C12.18 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +1
Query: 358 FLTNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQYEDGDTALSKEKNEMVGS 537
F+ NL T + E D+ ++ L I+LN +KE+ + F + D + + E++ +
Sbjct: 90 FMQNLFT-TFELATDRSLQTLLRIVLNAISKEIRNEFSFYVFASPYDVIWKRPRCEVMKT 148
Query: 538 KDLKKIHREIRDVMLQVAATISYL 609
I R+I V Q+ T+S L
Sbjct: 149 PPSDNIFRQIL-VPSQMNLTLSEL 171
>Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical
protein C33D3.4 protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 325 LLLSEDPQIKSFLTNLLTQSEEWILDKKVKKLSLIILNVANKEVLECWDFNIQYE-DGDT 501
+LL ++ ++ F N+ + E++ K LSLI + + + +LE WD N Y
Sbjct: 36 ILLEKEALVRKFFANVEFNAIEFVF----KLLSLIKMLIIFRRMLEKWDSNRLYSIFSIL 91
Query: 502 ALSKEKNEMVGSKD--LKKIHREIRDVMLQVA 591
A+ K E + D KIH+ ++D L+++
Sbjct: 92 AIIFNKIEKNHTLDDLWNKIHQIMKDSFLKLS 123
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 400 DKKVKKLS--LIILNVANK-EVLECWDFNIQYEDGDTALSKEKNEMVGSKDLKKIHREIR 570
D+K+ L L L NK +V EC D+ + D L++++ E L+K+H ++
Sbjct: 190 DRKLISLQDQLSTLKEVNKAKVEECEDYRVHNNDLRDLLNEKEAE------LRKLHNDVV 243
Query: 571 DVMLQVAATISYLPLL 618
D+ Q+ + PL+
Sbjct: 244 DLRGQIRVAVRVRPLI 259
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 400 DKKVKKLS--LIILNVANK-EVLECWDFNIQYEDGDTALSKEKNEMVGSKDLKKIHREIR 570
D+K+ L L L NK +V EC D+ + D L++++ E L+K+H ++
Sbjct: 190 DRKLISLQDQLSTLKEVNKAKVEECEDYRVHNNDLRDLLNEKEAE------LRKLHNDVV 243
Query: 571 DVMLQVAATISYLPLL 618
D+ Q+ + PL+
Sbjct: 244 DLRGQIRVAVRVRPLI 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,245,620
Number of Sequences: 27780
Number of extensions: 299982
Number of successful extensions: 704
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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