Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H20
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   6.5  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 397 LDKKVKKLSLIILNVANKEVL 459
           LDK V  L L++ N+  KEVL
Sbjct: 650 LDKPVDPLLLVLSNIHVKEVL 670


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 397 LDKKVKKLSLIILNVANKEVL 459
           LDK V  L L++ N+  KEVL
Sbjct: 650 LDKPVDPLLLVLSNIHVKEVL 670


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 126 LIERLQQYNRQTADNYVTTTNKKLYY 203
           +I  L        +NY    NKKLYY
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKLYY 328


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 310 QYGITLLLSEDPQIKSFLTNLLTQSEEWILDKKVKKLSLIILN 438
           Q  I+  L + P ++  L  +L +    ++ KK+K+L   +LN
Sbjct: 20  QDDISKFLKDRPYVQKQLHCILDRGHCDVIGKKIKELLPEVLN 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,038
Number of Sequences: 438
Number of extensions: 3641
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)