Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H18
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009671-1|AAH09671.1|  314|Homo sapiens family with sequence si...    31   4.1  
AF151848-1|AAD34085.1|  314|Homo sapiens CGI-90 protein protein.       31   4.1  
AK093877-1|BAC04239.1|  570|Homo sapiens protein ( Homo sapiens ...    31   7.2  
AK026130-1|BAB15370.1|  158|Homo sapiens protein ( Homo sapiens ...    31   7.2  

>BC009671-1|AAH09671.1|  314|Homo sapiens family with sequence
           similarity 82, member B protein.
          Length = 314

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +2

Query: 158 TSLLYRARLQAPGRPDLRLFVKVAKMSENVRAHAINSVYDTELLVYEELSKLYRALEE 331
           T  LY+   Q     D  L  ++A+ S +V   +  S  + +LLVYE L    RALE+
Sbjct: 99  TEKLYQLLTQYKESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEK 156


>AF151848-1|AAD34085.1|  314|Homo sapiens CGI-90 protein protein.
          Length = 314

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +2

Query: 158 TSLLYRARLQAPGRPDLRLFVKVAKMSENVRAHAINSVYDTELLVYEELSKLYRALEE 331
           T  LY+   Q     D  L  ++A+ S +V   +  S  + +LLVYE L    RALE+
Sbjct: 99  TEKLYQLLTQYKESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEK 156


>AK093877-1|BAC04239.1|  570|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36558 fis, clone TRACH2009107, highly similar to
           ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING (EC
           1.2.1.5). ).
          Length = 570

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 369 PRCTARGRGGSRKHWCWRTCARRGSAPATA-CAPW 470
           PR +      +R HW W +    G+ P+T+  +PW
Sbjct: 8   PRLSRTSSTSTRSHWAWSSSLAPGTTPSTSPSSPW 42


>AK026130-1|BAB15370.1|  158|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22477 fis, clone HRC10815. ).
          Length = 158

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 402 RKHWCWRTCARR---GSAPATACAPWTGSTRAPRXSSWR 509
           ++H CW   A     GSA  +AC P + S+R P  +S+R
Sbjct: 109 KQHPCWMHAAGTTAGGSAVMSACCPSSSSSRPPTRTSYR 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,299,138
Number of Sequences: 237096
Number of extensions: 977122
Number of successful extensions: 3200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3200
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)