Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H17
         (1009 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    32   0.63 
12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.1  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    31   1.5  
02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.5  

>03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,
            8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = +2

Query: 863  GXPXPXXPPXPKXPXXXXXAPPXNXPPXXVFXXPXXPXGXKXDPSXHPP 1009
            G P P  P  P  P      PP N P       P  P G    P   PP
Sbjct: 263  GPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPP 311


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = +2

Query: 869  PXPXXPPXPKXPXXXXXAPPXNXPPXXVFXXPXXPXGXKXDPSXHPP 1009
            P P  PP P         PP   PP   F  P  P      P   PP
Sbjct: 306  PLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSPP 352


>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +2

Query: 875  PXXPPXPKXPXXXXXAPPXNXPPXXVFXXPXXPXGXKXDPSXHPP 1009
            P  PP P+ P      PP   PP  +   P  P G    P  H P
Sbjct: 27   PYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPG---PPPPHQP 68


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +1

Query: 868  PXSXXSPXPXXPRXXXPXPPXXXPPXXGXSXPXXPXGXQXGPLXXPP 1008
            P +   P P  P+   P PP   PP    +    P     GP   PP
Sbjct: 321  PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367



 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = +2

Query: 869  PXPXXPPXPKXPXXXXXAPPXNXPPXXVFXXPXXPXGXKXDPSXHPP 1009
            P P  PP P         PP   PP      P  P   K  P   PP
Sbjct: 313  PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359



 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = +2

Query: 869  PXPXXPPXPKXPXXXXXAPPXNXPPXXVFXXPXXPXGXKXDPSXHPP 1009
            P P  P  P  P      PP   P       P  P G K  P   PP
Sbjct: 336  PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,456,277
Number of Sequences: 37544
Number of extensions: 254606
Number of successful extensions: 1045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2963829220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)