Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H13
(957 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 54 4e-08
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 43 7e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.10
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.14
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.18
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.24
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.32
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.55
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.97
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.2
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 53.6 bits (123), Expect = 4e-08
Identities = 47/184 (25%), Positives = 50/184 (27%), Gaps = 15/184 (8%)
Frame = +1
Query: 445 PPMGRQKNXGPPPGAXXXFPXXGGGGGXFXPXKXPPPPRGXGXGXX--------GPPPXP 600
PP ++N G PP G G PPPPR G PPP P
Sbjct: 314 PPPPSRRNRGKPP--------IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 601 PHKXPXXXXXXXXXXXXXXXXXXXXXXXXXXG------PPXXXHXXQXAPPXPXPPQXXP 762
P P G PP PP P PP P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 763 FXXX-FPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXPX 939
PP PP PP PP P P PP PPP+P P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL--PAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 940 XXXP 951
P
Sbjct: 484 PAAP 487
Score = 30.3 bits (65), Expect = 0.42
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 17/82 (20%)
Frame = +1
Query: 733 PXPXPPQXXP-FXXXFPPXXPPPXXXKXXXTP--PPPPXG--GXXPXXGXQXXXPXPPP- 894
P PP+ P PP PPP P PP P P P PPP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Query: 895 -----------XKTPPXXPPPS 927
K PP PPPS
Sbjct: 297 SRVSAAALAANKKRPPPPPPPS 318
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.7 bits (96), Expect = 7e-05
Identities = 27/87 (31%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 694 GPPXXXHXXQXAPPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPP-PPPXGGXXPXXGXQ 870
G P APP P P P P PP PP P P G P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPK--PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 871 XXXPXPPPXKTPPXXPPPSPXPXXXXP 951
P P P P PPPS P P
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTP 906
APP P P P P PP PP PP P P PP T
Sbjct: 1158 APPVPKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 907 PXXPPPS 927
P P PS
Sbjct: 1217 PPVPTPS 1223
Score = 37.9 bits (84), Expect = 0.002
Identities = 36/166 (21%), Positives = 40/166 (24%), Gaps = 5/166 (3%)
Frame = +1
Query: 445 PPMGRQKNXGPP---PGAXXX-FPXXGGGGGXFXPXKXPPPPRGXGXGXXGPPPXP-PHK 609
PP+ + + PP P A P P PP P+ PPP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 610 XPXXXXXXXXXXXXXXXXXXXXXXXXXXGPPXXXHXXQXAPPXPXPPQXXPFXXXFPPXX 789
P PP P P P P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK--PSVA 1129
Query: 790 PPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPS 927
PP P P P P P P P P P PS
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +1
Query: 730 PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXP--XPPPXKT 903
PP P P P PP PP PP PP P P P K
Sbjct: 1179 PPVPKPAAGVP--PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 904 PPXXPPPSPXPXXXXPK 954
PP P S P P+
Sbjct: 1237 PPVPAPSSEAPSVSTPR 1253
Score = 33.9 bits (74), Expect = 0.034
Identities = 22/85 (25%), Positives = 22/85 (25%)
Frame = +1
Query: 697 PPXXXHXXQXAPPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXX 876
PP P P P P P PP P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPA--PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 877 XPXPPPXKTPPXXPPPSPXPXXXXP 951
P P P P P PS P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 33.5 bits (73), Expect = 0.045
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +1
Query: 730 PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPP 909
PP P P P P PP P P P P P P P P
Sbjct: 1092 PPVPKPSVAAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 910 XXPPPSPXPXXXXP 951
P PS P P
Sbjct: 1151 PVPAPSGAPPVPKP 1164
Score = 30.7 bits (66), Expect = 0.32
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 2/83 (2%)
Frame = +1
Query: 694 GPPXXXHXXQXAPPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQX 873
G P APP P P P P PP P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPK--PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 874 XXPXPPPXKT--PPXXPPPSPXP 936
P P PP PP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 30.3 bits (65), Expect = 0.42
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPP-PXXXKXXXTPPPP---PXGGXXPXXGXQXXXPXPPP 894
APP P P P P PP P + PPP P P P P
Sbjct: 1031 APPIPVPSTAPPVP--IPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Query: 895 XKTPPXXPPPSPXPXXXXP 951
PP P P P
Sbjct: 1089 SGIPPVPKPSVAAPPVPKP 1107
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 793 PPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXPXXXXP 951
PP PP P P P P P PPP P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/74 (24%), Positives = 18/74 (24%)
Frame = +1
Query: 730 PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPP 909
PP P P P PP P P P PPP P
Sbjct: 1012 PPVPKLSSKAP-PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 910 XXPPPSPXPXXXXP 951
P P P P
Sbjct: 1071 SEIPSIPAPSGAPP 1084
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPP 894
+PP P P P P PPP PPPPP G G P PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG----VAGAGPPPPPPPP 782
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = +1
Query: 697 PPXXXHXXQXAP-PXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQX 873
PP AP P P PP P PP PPP PPPPP G +
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPA-PIMGG-PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 874 XXPXPPPXKTP 906
P P P
Sbjct: 793 YAPAPQAEPEP 803
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 781 PXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXP 936
P PPP P P P P G P PP PPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.079
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 820 TPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXP 936
+PPPPP P P PPP PPP P P
Sbjct: 731 SPPPPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 535 PXKXPPPPRGXGXGXXGPPPXPP 603
P PPPP G G PPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 590 GGPXXPXPXPRGGGGXXXGXKXPPPPP 510
GGP P P P G G PPPPP
Sbjct: 759 GGPPPPPPPPGVAGA---GPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 545 PPPPPGXXGXVXGAPPXXPPTKXP 616
PPPPP G V GA P PP P
Sbjct: 761 PPPPPPPPG-VAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 370 PPPRXXFXXXGXPPPPPGGGXXXXPXXP 287
PPP PPPPPG P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 391 PLXXGXGPPPRXXFXXXGXPPPPP 320
P+ G PPP PPPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.10
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +1
Query: 730 PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPP 909
PP P Q P PP PP + T P G Q P PP + P
Sbjct: 224 PPTYTPKQADPLPAP-PPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 910 XXPP 921
PP
Sbjct: 283 PRPP 286
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 880 PXPPPXKTPPXXPPPSPXPXXXXPKK 957
P PPP PP PPP P P +K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 778 PPXXPPPXXXKXXXTPPPPPXGG 846
PP PPP + PPPPP G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 879 PXPPPXXNPPXXPPPLSXP 935
P PPP PP PPP P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 730 PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXG 843
PP P PP P PP PPP K P G
Sbjct: 10 PPPPPPPGFEP--PSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 370 PPPRXXFXXXGXPPPPPGGG 311
PPP F PPPPP G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 547 PPPPRGXGXGXXGPPPXPP 603
PPPP G PPP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 535 PXKXPPPPRGXGXGXXGPPPXPP 603
P PPPP G PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 886 PPPXKTPPXXPPPSPXPXXXXP 951
PPP PP PPS P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/80 (27%), Positives = 22/80 (27%), Gaps = 2/80 (2%)
Frame = +1
Query: 697 PPXXXHXXQXA--PPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQ 870
PP Q A P P Q PF PP PP P P
Sbjct: 461 PPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMS 520
Query: 871 XXXPXPPPXKTPPXXPPPSP 930
PP PP P P P
Sbjct: 521 QPPMVPPGMALPPGMPAPFP 540
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.1 bits (67), Expect = 0.24
Identities = 33/131 (25%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = +1
Query: 547 PPPPRGXGXGXXGPPPXPPHKXPXXXXXXXXXXXXXXXXXXXXXXXXXXG---PPXXXHX 717
PPPP G PPP P H P G PP H
Sbjct: 208 PPPPMHHKPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH- 265
Query: 718 XQXAPPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPX 897
+ P PP P PPP + PPPP P PP
Sbjct: 266 HEPGEHMPPPPMHHEPGEHMP---PPPMHHEPGEHMPPPPM-----HHEPGEHMPPPPMH 317
Query: 898 KTPPXXPPPSP 930
P PP P
Sbjct: 318 HEPGEHMPPPP 328
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 701 PXXNTXPXXXPQXPXPHKXXPFXXFFP--HXPPPPXXXKXXKPPPPP 835
P + P P H P P H PPPP + + PPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -2
Query: 935 GXGEGGGXXGGVXXGGGXGXXXCXPXXGXXPPXGGGGGVXFXLXXXGGGXCGGKXXXKGX 756
G G GG G GG G P P G GGG GGG G G
Sbjct: 206 GFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP----GGFGGGLGGFGGGPGGF 261
Query: 755 XCGGXGXGGAXW 720
G G GG W
Sbjct: 262 GGGPGGHGGPGW 273
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 614 GXLWGGXGGGPXXPXPXPRGGGG 546
G +GG GGG P P P G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG 209
Score = 27.9 bits (59), Expect = 2.2
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -2
Query: 950 GXXXXGXGEGGGXXGGVXXGGGXGXXXCXPXXGXXPPXGGG-GGVXFXLXXXGGGXCGGK 774
G G G GG G GG G G GGG GG GGG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 773 XXXKGXXCGGXGXGG 729
G G G GG
Sbjct: 249 GGLGGFGGGPGGFGG 263
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.55
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 820 TPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXPXXXXP 951
TPPPPP P P PP P PP P P P
Sbjct: 1706 TPPPPPMSVPPP--------PSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.5 bits (63), Expect = 0.73
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 778 PPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPS 927
PP P P PPP P P PP PP P S
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 778 PPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPP 924
PP P + PPPP P G P P P + P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXP 855
AP P PP P PP PP PPPP P
Sbjct: 1704 APTPPPPPMSVP-----PPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +1
Query: 820 TPPPPPXGGXXPXXGXQXXXPXPPPXKTPPXXPPPSPXPXXXXP 951
TPP P P P P PP PP P P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPP 837
APP P P PP P + PPPP
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.97
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = +1
Query: 727 APPX-PXPPQXXPFXXXFPPXXPPPXXXKXXXTPPPPPXGGXXPXXGXQXXXPXPPPXK- 900
APP P PP P PP PP + PP P P PPP +
Sbjct: 123 APPSAPAPPT--PQSELRPPTSAPP---RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 901 -TPPXXPPPSP 930
P PP +P
Sbjct: 178 AAPVKSPPSAP 188
Score = 29.1 bits (62), Expect = 0.97
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = +1
Query: 727 APPXPXPPQXXPFXXXFPPXXPPPXXXKXXXTPP--PPPXGGXXPXXGXQXXXPXPPPXK 900
APP P P P PPP P PP P PP
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 901 TPPXXPPPSPXPXXXXP 951
+ P PP P P
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 929 GEGGGXXGGVXXGGGXGXXXCXPXXGXXPPXGGGGGVXFXLXXXGGGXCGGKXXXK 762
G GG G GGG G G GG GG GG G K K
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.152 0.560
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,119,864
Number of Sequences: 5004
Number of extensions: 36030
Number of successful extensions: 388
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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