Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H12
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 60 3e-10
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 44 3e-05
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 38 0.002
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 33 0.041
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.12
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 30 0.38
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.38
SPCC1840.09 |||NAD dependent epimerase/dehydratase family protei... 30 0.50
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.50
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.87
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 1.2
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 2.7
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.7
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 27 3.5
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 27 3.5
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.1
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.1
SPAC1002.08c |mtf1||mitochondrial RNA polymerase specificity fac... 26 8.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.1
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 8.1
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 26 8.1
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 8.1
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 329 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 505
+ TP FP+S++EG + + K+ G+ V DE + +ETDK PV AP GV+KE VK+G
Sbjct: 45 IKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEG 104
Query: 506 ETVKAGQKL 532
+T+ Q +
Sbjct: 105 DTITIDQDI 113
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 338 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETV 514
P+ ++ EG++ K K GDS + +++LE+ETDK + V +G++ ++ ++ G +
Sbjct: 41 PALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGSNI 100
Query: 515 KAGQKL 532
G+ +
Sbjct: 101 PVGKNI 106
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 329 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 505
+ P+ +++ G++ KK+GD + +V+ EIETDK I G + ++ ++ G
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETG 115
Query: 506 -ETVKAGQKL 532
+ V G+ L
Sbjct: 116 TKDVPVGKPL 125
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 33.5 bits (73), Expect = 0.041
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = -2
Query: 519 ALTVSPSLTYNSLMTP----WPGAMTGMAVL-----SVSISRTTSSAATLSPTFLSNLTS 367
+L +P Y SLM W +TG VL S S+S TTSS+++ SP+ S T+
Sbjct: 93 SLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTT 152
Query: 366 PSETESGKLGVVTSCSTS 313
S + S +S S+S
Sbjct: 153 TSPSSSSSSSSSSSSSSS 170
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.12
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 558 ASPVISNLNS-FCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 382
A+P S+ S F + T S + +Y+S ++ + T S S TSS T S T
Sbjct: 76 ATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTES 135
Query: 381 SNLTSPSETESGKLGVVTSCSTS 313
S+L PS S L TS S
Sbjct: 136 SSLLDPSSVSSAILPSSTSVEVS 158
Score = 27.1 bits (57), Expect = 3.5
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = -2
Query: 585 ASVAAAFLGASPVI------SNLNSFCPALTVSPSLTYNSLMTPWPG-AMTGMAVLSVSI 427
+SV++A L +S + S+L+S P + + S +S + P + T + S +
Sbjct: 142 SSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAA 201
Query: 426 SRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTS 313
+TSS+ S + +S+ +SPS + S L +S STS
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTL-TSSSLSTS 238
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 30.3 bits (65), Expect = 0.38
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = -2
Query: 600 VSTFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISR 421
V T +S+A + + AS +S N VS + +S + + S +IS
Sbjct: 219 VPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISS 278
Query: 420 TTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSRGF 304
TSS+A+ SPT S + SGK G+ T G+
Sbjct: 279 ATSSSASASPT--------SSSVSGKRGLAWIPGTDLGY 309
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.38
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Frame = -2
Query: 597 STFGASVAAAFLGASPVISNLNSFCPALTVSP-SLTYNSLMTPWPGAMTGMAVLSVSISR 421
S +S ++ +S ++S ++ +T S SLT S + P ++ +++ S S
Sbjct: 689 SPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSN 748
Query: 420 T-----TSSAATLSPTFLSNLTS--PSETESGKLGVVTSCST 316
T TSS+A +S T +SN++S PS T S + +T+ ST
Sbjct: 749 TLLSSITSSSAIVSSTTVSNISSNLPSATASSQ-SQLTNSST 789
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -2
Query: 549 VISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLT 370
+ S ++S T S + S T P + T +++ S S S T SSA+T SP+ +S+
Sbjct: 560 ISSGISSSSIPSTFSSVSSILSSSTSSPSS-TSLSISSSSTSSTFSSASTSSPSSISSSI 618
Query: 369 SPSET 355
S S T
Sbjct: 619 SSSST 623
Score = 25.8 bits (54), Expect = 8.1
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -2
Query: 597 STFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTG-MAVLSVSISR 421
ST +A+ S + S+++S L+ SP+ + +SLM ++G ++LS SIS
Sbjct: 598 STSSTFSSASTSSPSSISSSISSSSTILS-SPTPSTSSLMISSSSIISGSSSILSSSIS- 655
Query: 420 TTSSAATLSPTFLSNLTSPSETESGKLGVVTSCS 319
T +++LS S + S S S ++ S S
Sbjct: 656 TIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSS 689
>SPCC1840.09 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 546 ISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSA 406
ISNL S + + P YN P+ GA+ + +S SI+R TS A
Sbjct: 183 ISNLRS----IFLRPGFMYNFNDRPFTGALASLFTVSSSINRATSGA 225
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.50
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 531 SFCPALTVSPSLTYNSLMTPWPGAM--TGMAVLSVSISRTTSSAATLS 394
SF + V+ +L YN P P A+ G V +VS S TSS TL+
Sbjct: 4 SFILSTLVAGALAYNEFSAPGPNAVLQEGGGVNTVSWSNLTSSTVTLT 51
Score = 26.2 bits (55), Expect = 6.1
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 525 CPALTVSPS-LTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETES 349
C T+S S L+Y+ ++ A + + + S TSS++T S + S+ +SPS + S
Sbjct: 111 CSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSS 170
Query: 348 GKLGVVTSCSTS 313
S S+S
Sbjct: 171 KSSSSSKSSSSS 182
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.87
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 217 QNTCTLTRNQTEPTESSGRPQSSSIHP 297
+NT ++ R +T PT+SSG ++ HP
Sbjct: 106 ENTSSVKRQKTLPTQSSGEEEAKYSHP 132
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 386 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKL 532
+ G+ + A E E+E K +P++A GV+ +L + G ++ AG L
Sbjct: 727 ETGEHIKAGEAYAEVEVMKMIMPLVATEDGVV-QLIKQPGASLDAGDIL 774
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 LRVSTFNKRKCYDAARS--TSRRCTGVRASPSASSQQL 209
LR+S+FN + Y ++RS T+ G ASPS + L
Sbjct: 252 LRISSFNTKNDYSSSRSKTTASSSNGTFASPSFNISSL 289
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +1
Query: 112 VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSS 285
V ++ N+ L ++ +VP+ HP+ +N S + + + P +S Q+S
Sbjct: 349 VTTVPSNSPATLNSYTTSVPSGMSRHPMLMNPSTPEPSLGVNSPSLRPLQSLNNVQNS 406
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 305 NPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 484
N LL++ PS P + L +V + + +L I ++ H K
Sbjct: 28 NQLLIDMGFIQPSMPGIFQY--LPLGLRVQNKICD---LLHISMRSLGASAISLAHLSSK 82
Query: 485 ELYVKDGETVKAGQKLFRL 541
E++ K G K G +LFRL
Sbjct: 83 EIWEKSGRWQKTGSELFRL 101
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 450 MAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGK 343
+ V + T S A ++ FLSNL S +TES +
Sbjct: 119 LQVTKAQTNSATGSEALMAKNFLSNLASRIQTESAQ 154
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 115 RSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 294
R+ E+ T L+ A+P S PV P+ QN+ ++ P E G + SIH
Sbjct: 417 RAPEESPMTFLQKKMAALPTSSPVRPMLKPTLQLQNS---PLSKLVPQE-VGNKVNDSIH 472
Query: 295 PLHESPA 315
P+
Sbjct: 473 TTSNQPS 479
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 251 NQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADE 415
+QP L + + +++ QD+ P+FPDS E D VG S++ +E
Sbjct: 298 DQPACLAFACSLTHANSKRSIMLPQDID-PTFPDSEPEDDGHASSTVG-SLSKEE 350
>SPAC1002.08c |mtf1||mitochondrial RNA polymerase specificity
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 83 QSAYDASYFTNQNLKEFPIVRS 18
+S+Y +SY NQNL + +V+S
Sbjct: 30 RSSYKSSYLVNQNLMDEALVKS 51
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 144 ARSTSRRCTGVRASPSASSQQLKRPKYLHP-YTQPN 248
A +S T ASP+ +Q +P Y P Y+QP+
Sbjct: 71 AGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPS 106
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 145 LEAHPDAVPASG-PVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 294
++A ++P SG + P++ N+S++ + + N TESS RP SS ++
Sbjct: 145 MQASVHSLPLSGCSIGPVRTNHSSSLSNSS---NSLLQTESSLRPNSSFVN 192
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -2
Query: 543 SNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSP 364
++L SF L + S Y+S +P ++ SV S TSS+ + S + S+ +
Sbjct: 488 ASLTSFGNFLGTATS--YSSASASYPSTSMSASLSSVHTSSATSSSKSSSSS--SSRSGS 543
Query: 363 SETESGKLGVVTSCSTS 313
S + S + G +S +S
Sbjct: 544 SSSSSSRSGSTSSSGSS 560
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +1
Query: 118 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 297
S + N TT A P N++ Q+T TRN T S+G +
Sbjct: 143 STTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGA 202
Query: 298 LHES 309
H S
Sbjct: 203 SHRS 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,586,682
Number of Sequences: 5004
Number of extensions: 52561
Number of successful extensions: 201
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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