Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H12
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 78 1e-14
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 38 0.013
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 31 0.82
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 4.4
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 29 4.4
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 29 4.4
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 29 4.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.7
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 77.8 bits (183), Expect = 1e-14
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Frame = +2
Query: 137 RRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQV-ASIHFTNPL 313
R S H + L R QS+ S+ Q P + A T L +P LV + ++ +S +F
Sbjct: 5 RAVSVH-RFLSRAARQSVTAASSAQ-PSLQAK---TSLLEP--LVQNVRITSSANFHMSA 57
Query: 314 LVEQDVTT---PSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 484
+ DV T P+F +S+SEGD++ K+ GD V DE+V EIETDKT++ V AP G I
Sbjct: 58 VRMSDVITVEGPAFAESISEGDIRWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIV 117
Query: 485 ELYVKDGETVKAGQKLFRLE 544
E V+DG V A QKL++L+
Sbjct: 118 EFLVEDGAKVTAKQKLYKLQ 137
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +2
Query: 386 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEITG 553
K GD+++ + V E+++DK A+ + G++K+LY + + GQ L +EI G
Sbjct: 53 KEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGMARVGQALIDVEIEG 108
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +2
Query: 182 QSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVS 361
QS R ST K + P A + ++ + L V P+ ++
Sbjct: 31 QSSRALSTGAAAKSSGLVGQVARQYPNAAAFSIKQVRLYSSGNLPKHNRVALPALSPTME 90
Query: 362 EGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 505
G V KK GD ++ +++ EIETDK + P G + ++ +++G
Sbjct: 91 LGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEG 139
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = -2
Query: 561 GASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 382
G++ ++ + F +L S S + TP P ++G++ + S TTS +T S + +
Sbjct: 370 GSTASTTSGSLFSTSLGSSQSPGSSVSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTV 429
Query: 381 SNLTSPSETESGKLGVVTSCSTSRG 307
S+ + PS T + T+ ST+ G
Sbjct: 430 SDTSGPSTTSGPSTTLGTTQSTTSG 454
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 374 KLDKKVGDSVAADEVV-LEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEIT 550
K+D+KV D++ D VV ++++ +PVM G K+ G VKA ++ ++I
Sbjct: 235 KVDQKVVDAIGKDMVVAVQVDVADNGMPVMKVLEGKPKDKETPVGIIVKANDQVQFVQIV 294
Query: 551 G 553
G
Sbjct: 295 G 295
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -2
Query: 594 TFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTT 415
TFG + + + + P +S N+ SPS++ G+ T + R+T
Sbjct: 407 TFGTA-KSVIVSSKPSLSGYNN---RANPSPSMSDLRTTKSMAGSTTSLLSERAPKKRST 462
Query: 414 SSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSR 310
SS P ++ + P G + S STSR
Sbjct: 463 SSRRNQEPITITYIGRPRTPSEGDVASTVSSSTSR 497
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 121 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 297
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 298 LHESPA 315
+HE PA
Sbjct: 388 MHEIPA 393
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 121 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 297
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 100 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 155
Query: 298 LHESPA 315
+HE PA
Sbjct: 156 MHEIPA 161
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 121 ISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP- 297
I N +TL P + + H LQ + +T+NQ P+E +G P +S +
Sbjct: 332 IMANGSTL----PPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSELNGYPAASQLSSF 387
Query: 298 LHESPA 315
+HE PA
Sbjct: 388 MHEIPA 393
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 516 LTVSPSLTYNSLMTPWPGAMTGMAVLSVSISR--TTSSAATLSPTFLSNLTSPSETES 349
+T SPS + S T P + + SVS S T SS AT S +S L+S T S
Sbjct: 1977 ITPSPSQSTESTQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGTTVS 2034
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +2
Query: 200 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 358
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 359 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 466
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +2
Query: 200 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 358
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 359 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 466
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +2
Query: 200 STTQTPKILAPLHATKLNQPRALVA----HNQVASIHFTNPL---LVEQDVTTPSFPDSV 358
S PK+ APL T++ Q +VA Q PL ++Q+V T + P
Sbjct: 3417 SQADVPKVAAPLEQTQIQQEVPMVAAPLEPTQADVPKVAAPLEQSQIQQEVPTVAAPSEP 3476
Query: 359 SEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAP 466
++ DV + + AD + ++T I P
Sbjct: 3477 TQADVPKEAAPSEPSQADVPKVAAPLEQTQIQQEVP 3512
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,649
Number of Sequences: 27780
Number of extensions: 304712
Number of successful extensions: 1245
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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