Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H12
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 429 SRRTKPPFRSWRP 467
           SRRT PP   W+P
Sbjct: 411 SRRTSPPPEDWKP 423


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 272  AHNQVASIHFTNPLLVEQDVTTPSFP 349
            A+NQV S   + PLL +     PS P
Sbjct: 1089 AYNQVGSGPLSEPLLTQTMEDVPSIP 1114


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 272  AHNQVASIHFTNPLLVEQDVTTPSFP 349
            A+NQV S   + PLL +     PS P
Sbjct: 1085 AYNQVGSGPLSEPLLTQTMEDVPSIP 1110


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 222 YLHPYTQPN*TNRELWSPTIK 284
           YL+  T  N   R  WS T+K
Sbjct: 378 YLYQNTMSNNNQRTEWSATVK 398


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 222 YLHPYTQPN*TNRELWSPTIK 284
           YL+  T  N   R  WS T+K
Sbjct: 416 YLYQNTMSNNNQRTEWSATVK 436


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 456 TGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTS 313
           T  A  S+  S + ++ A  +  +     SPS T S      +S STS
Sbjct: 32  TSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTS 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,406
Number of Sequences: 438
Number of extensions: 3574
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)