Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H11
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   1.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   1.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   2.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.6  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 209 FFLQQSYSVTKLEIWIR*KPPITFLYF*YKSSHLNRNGLSESSN 340
           FF+       +++  +  + P+ F Y+ YK +H     +S +SN
Sbjct: 416 FFITDGEKAARMQAKVN-RQPVWFYYYTYKGAHSISEIMSGTSN 458


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 209 FFLQQSYSVTKLEIWIR*KPPITFLYF*YKSSHLNRNGLSESSN 340
           FF+       +++  +  + P+ F Y+ YK +H     +S +SN
Sbjct: 416 FFITDGEKAARMQAKVN-RQPVWFYYYTYKGAHSISEIMSGTSN 458


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 446 SQYINDRLLVCTKAFHGGPQ 387
           S Y N   L CT  F GGPQ
Sbjct: 6   SMYNNVSPLQCTSPFLGGPQ 25


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -2

Query: 481 CDMACRCMLDLVVNISMIACSSV 413
           C   C+C  D   N + + CS +
Sbjct: 761 CPAGCKCYNDRTWNTNAVDCSGL 783


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 33  SLKI*VDLWTQAGRLLFLCSV*LNKF 110
           S+ + VD+W     +L LC++ L+++
Sbjct: 139 SIWLAVDVWMCTASILNLCAISLDRY 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,098
Number of Sequences: 438
Number of extensions: 5723
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)