Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H10
(881 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 104 1e-24
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 8.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.6
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 104 bits (249), Expect = 1e-24
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Frame = +1
Query: 160 GMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXX 339
GM +KYL+F FN +FA+ GL IL +G+ + ++ E
Sbjct: 4 GMGMIKYLLFIFNFVFAVCGLGILTLGVLIHLQILG-VSKQIETGLAFPSITLIVLGSII 62
Query: 340 XXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY--MKHTDLEDSVMRNLNAS 513
CCGA++E+HCM ITF+ FLL I + ++AV + + +K+ D ++
Sbjct: 63 FVISFFGCCGAIRESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEI 122
Query: 514 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTEN 693
Y ++ + ID IQ +LQCCG++S +D+ D PIP++CC++ E N T +
Sbjct: 123 FNGYFLNSESKDFIDFIQKNLQCCGVHSLSDYNDK--PIPASCCNSPENN-------TCS 173
Query: 694 STNFHSKGCLTKLVVHMKDXXXXXXXXXXXXXXXXXXXXXFACCLARSIRS 846
+N ++ GC+ L +K A CLA SI++
Sbjct: 174 ISNSYTNGCVEALKDTVKLAGTVFGSVAIAIAIVELIGIICALCLANSIKN 224
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 117 IVLLRNKMIHTSAN 76
+V+ RNK +HT+ N
Sbjct: 76 VVIARNKSMHTATN 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.6
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 165 VLCKVPHVLLQ 197
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,029
Number of Sequences: 438
Number of extensions: 4636
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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