Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H05
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 120 3e-28
SPAC1782.05 |||phosphotyrosyl phosphatase activator homolog|Schi... 118 9e-28
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 28 2.1
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 28 2.1
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 27 2.7
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 27 3.6
SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces ... 27 3.6
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 6.3
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 26 8.4
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 8.4
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 120 bits (289), Expect = 3e-28
Identities = 68/205 (33%), Positives = 105/205 (51%)
Frame = +1
Query: 274 RFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINML 453
+F P+K + +DMT + +S+AY F+ LN + G + S V+K++ +L
Sbjct: 22 QFKTPEKLIVEASDMTAFRQSKAYYRIFDFLQRLNIASVGVN-DYHVEYSTRVEKLVRIL 80
Query: 454 DKIDRIIDEFPPVEQPQRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIKVYLQE 633
++ I PP RFGN AFR W E ++ +++Q++ + L A E+ Y
Sbjct: 81 CRVKEITKTVPPASGRHRFGNPAFRIWHEKLRDSASQIMDIIIPDSLSKAKVELLDYFLG 140
Query: 634 SFGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARKLQKTYXX 813
SFGN+ RID+GTGHE+ F+ F+ L +G L D A L I + YL + R+L +TY
Sbjct: 141 SFGNSQRIDFGTGHELNFLGFIKGLDLLGLLDAADYKAIALYITHVYLEVCRELVQTYRL 200
Query: 814 XPXAXXXFWXXGXXTTIXFIPFIWG 888
P W FIP+I+G
Sbjct: 201 EPAGSHGVWGLDDH---FFIPYIFG 222
>SPAC1782.05 |||phosphotyrosyl phosphatase activator
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 118 bits (285), Expect = 9e-28
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 271 HRFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINM 450
+R P + + D+ ++++ +AY F+ L+E++K KP++ S +++ ++N+
Sbjct: 8 NRCFVPVRRILDNEDLKLFKEGDAYKLIDSFICDLDEAVKDKPISASIPQSSSIEHVLNI 67
Query: 451 LDKIDRIIDEFPPVEQP-QRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIKVYL 627
LD++ I E P ++ RFGN AF+ +++ V T L + E H A E Y
Sbjct: 68 LDRVGEIKQENPAIDNMGSRFGNPAFQSFYDQVYIE-TPKLHQVFGIE-HNAAMEAGRYF 125
Query: 628 QESFGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARKLQKTY 807
ESFGN RIDYG+GHE+ F+ +L L ++G D A V+ +F KY+ + R LQ Y
Sbjct: 126 YESFGNRKRIDYGSGHELYFMSWLLILKQLGIFTKNDYPALVVRVFVKYVELMRSLQIFY 185
Query: 808 XXXPXAXXXFWXXGXXTTIXFIPFIWG 888
P W F+PF++G
Sbjct: 186 TLEPAGSHGVW---GLDDFHFLPFLFG 209
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +1
Query: 322 IWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINMLDKIDRIIDEFPPVEQP 501
+W + + +Y F ++GK T + + N++++ +++ +D ++++FP V
Sbjct: 1477 VWHVNPKFTQYRLF------DVRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFT 1530
Query: 502 QRFG 513
R G
Sbjct: 1531 GRIG 1534
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 43 WRMSFDWTQVMDIYVL*INL*MCYRSHRNTLTQH*YYKLV 162
W + F W ++ +++L L C+ S R LT+H YY+ +
Sbjct: 472 WEL-FAWGWLIVLFILPERL-CCFMSRRTGLTKHPYYRYI 509
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 529 EWFENVKTNSTQLLQEALQPELHLAIP 609
+WF+N + STQ L + + EL AIP
Sbjct: 624 DWFKNFQRYSTQKLASSFERELWEAIP 650
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 463 DRIIDEFPPVEQPQRFGNAAFREW-FENVKTNSTQLLQEALQPELHLAIPEIKVYLQES 636
+ I + P E+P GNA +W FE VK + + +L P+ + + K L S
Sbjct: 291 ETINNTLKPFEEPIAEGNADIEDWTFETVKKSDSTVLGNTSIPKNSIISSQNKEELPSS 349
>SPBC14F5.04c |pgk1||phosphoglycerate kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +1
Query: 415 KVSDNVKKIINMLDKIDRII 474
KV+D ++ I N+LDK++R+I
Sbjct: 213 KVADKIQLIDNLLDKVNRLI 232
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 338 SDFSQMVISVMDLTAFCGSTKRWSGG-RVWMFSLFFTSPIVFAVLDMIVMFFKSIYR 171
S+F I + DLT R S + +FSLF SP++ A+ M+ F K Y+
Sbjct: 1031 SNFLTWEIIISDLTRTYHLIPRGSSTVSIILFSLFLVSPLICALATMLA-FQKFFYQ 1086
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 658 DYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNK 771
D+G + + +F C +YKI F + + N+ + FN+
Sbjct: 337 DHGPSYGLYLYLFFC-IYKIKFQKCDMNIVMLTKYFNE 373
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 289 QKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINMLDKIDR 468
+K +K+ D+ E S++Y E + L+E+ + + +KII ++D+
Sbjct: 349 EKFLKACKDLE--EVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDK 406
Query: 469 IIDEF 483
+IDE+
Sbjct: 407 MIDEY 411
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,562,057
Number of Sequences: 5004
Number of extensions: 74359
Number of successful extensions: 165
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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