Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H05
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0817 - 6185881-6187074                                          133   2e-31
01_06_1372 + 36726129-36728240                                         31   0.94 
12_01_0242 + 1812891-1812897,1814073-1814830                           29   6.7  
01_05_0162 + 18759647-18759663,18760128-18760131,18760270-187606...    29   6.7  
09_03_0217 + 13532018-13532405,13532706-13533175                       28   8.8  

>06_01_0817 - 6185881-6187074
          Length = 397

 Score =  133 bits (321), Expect = 2e-31
 Identities = 82/247 (33%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
 Frame = +1

Query: 169 WR*IDLKNITIMSNTANTI-GDVKKSENIHTLPPDHRFVEPQKAVKSITDMTIWEKSEAY 345
           +R I +  I   +NTA  +   V +   +    P   F  P K + S  D+  +  S   
Sbjct: 57  YRPIRMPAINAPTNTAAIVLSPVPQPLPVPPASPPFAFQVPAKRITSPDDIARFHASVHG 116

Query: 346 MEYTGFVATLNESIKGKPLT--VDCKVSDNVKKIINMLDKIDRIIDEFPPVEQPQRFGNA 519
             + GFVA L+ S+ G+ L+  +    S  V  ++ ++  +   +   PP+    R+GN 
Sbjct: 117 RHFLGFVAALSASVHGRKLSDPLPSPPSPVVSALLELISALSAFVASTPPLPHNSRYGNP 176

Query: 520 AFREWFENVKTNSTQLLQEAL----QPELHLAIPEIKVYLQESFGNATRIDYGTGHEMAF 687
           AFR W E +  ++ QL+   +     P+L  A  E+  YL +SFGNATRIDYGTGHE  F
Sbjct: 177 AFRLWHEKLSDSANQLIAPIMATAGSPDLAGAEAELAPYLLDSFGNATRIDYGTGHETNF 236

Query: 688 VMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARKLQKTYXXXPXAXXXFWXXGXXTTIX 867
             FL CL ++G +   D  A VL +F  YL++ R LQ TY   P      W         
Sbjct: 237 AAFLYCLARLGLITEADYPAVVLRVFAAYLDLMRTLQDTYLLEPAGSHGVW---GLDDYH 293

Query: 868 FIPFIWG 888
           F+PFI+G
Sbjct: 294 FLPFIFG 300


>01_06_1372 + 36726129-36728240
          Length = 703

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -1

Query: 309 NGF--NSFLWLNKAMVWRKSVDVFTLFHISNSICSVGHDCDVF*IYLSPXKD 160
           NGF   +F    +A V  K +DVF+   + N +C+VG   D   +Y    KD
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKD 468


>12_01_0242 + 1812891-1812897,1814073-1814830
          Length = 254

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
 Frame = +1

Query: 271 HRFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIINM 450
           HRF + ++ V    ++  W+ SEA+  +    A    +  G+P  +     D     I+ 
Sbjct: 26  HRFCDNKRYVCMYKNIEQWDDSEAFDNFKNAKARFWANYHGQPSDISLPDPDMYIDKIDH 85

Query: 451 LDKID-RIIDEFPPVEQP-QRFGNAAFREWFENVKTNS--TQLLQEALQPELHLAIP-EI 615
             KID  +I +   V  P +R       +   +  T++   Q   ++   ++++  P E+
Sbjct: 86  NSKIDPELIADLKMVRLPFERDDELLPADGLGSTDTDNKCQQKQNQSGNWDIYVEKPTEV 145

Query: 616 KVYLQESFGNATRIDYGTGHE 678
             + Q+S  N   +D+GT HE
Sbjct: 146 NKWEQDSRSN---MDWGTKHE 163


>01_05_0162 +
           18759647-18759663,18760128-18760131,18760270-18760617,
           18760801-18761016,18763367-18763435,18763560-18764209,
           18764993-18765089,18765170-18765223,18765305-18765435,
           18766818-18767008,18767937-18768574
          Length = 804

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
 Frame = +1

Query: 178 IDLKNITIMSNTANTIGDVKKSENIHTLPPDHRFVEPQKAVKSITDMTIWEKSEAYMEYT 357
           I L++ + ++  A  IGD  K+E++ +   +   V+P   + + TD+ + + +   +E  
Sbjct: 373 IGLEDASAIAKAAKAIGDASKNEHMRSSFKEAGAVKPLLQLLNHTDVPVRKAAVYALEKL 432

Query: 358 GFVATLNESIK---GKPLTVDCKVSDN-----VKKIINMLDKI 462
              + + E IK   G  L  D     N     ++KII ML +I
Sbjct: 433 SVSSIVCEQIKTDGGLKLLADIVKDPNTPVEQLEKIIIMLSRI 475


>09_03_0217 + 13532018-13532405,13532706-13533175
          Length = 285

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 514 YQIFEVVPLEGTHQLFYQFYPTCL 443
           Y  F+++P++  H + Y F   CL
Sbjct: 150 YPTFDIIPIKSAHNIVYHFAEICL 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,278,030
Number of Sequences: 37544
Number of extensions: 410428
Number of successful extensions: 810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)