Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H05
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-16|AAK29984.1|  375|Caenorhabditis elegans Hypothetical...   155   4e-38
AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical ...    29   6.0  
Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC024859-16|AAK29984.1|  375|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.20a protein.
          Length = 375

 Score =  155 bits (376), Expect = 4e-38
 Identities = 81/208 (38%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
 Frame = +1

Query: 268 DHRFVEPQKAVKSITDMTIWEKSEAYMEYTGFVATLNESIKGKPLTVDCKVSDNVKKIIN 447
           ++ +  P+K +K++ D+  W  S+AY EY  F+  LN+S+ G   T D + +D V   I+
Sbjct: 3   ENSYKPPEKMIKNVFDLNPWYFSKAYEEYLAFLHRLNDSVVGVHTTADMRCTDLVISFID 62

Query: 448 MLDKIDRIIDEFPPVE-QPQRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIKVY 624
           MLDK+++  +E P  +   QRFGN A+R+++E +   S  LL   L   +H A+ E+  Y
Sbjct: 63  MLDKLEKWAEEIPLEDVSEQRFGNKAYRKFYEKLCKESPDLLASVLPENVHDALVELVPY 122

Query: 625 LQESFGNATRIDYGTGHEMAFVMFLCCLYKIGFLQLEDNVATVLIIFNKYLNIARKLQKT 804
             ESFGNATRIDYG+GHE  F++ L CL K+G     D+   VL IFNKYL + R LQ  
Sbjct: 123 FTESFGNATRIDYGSGHEANFLILLFCLQKLGVFTENDDKVLVLRIFNKYLRVCRHLQTR 182

Query: 805 YXXXPXAXXXFWXXGXXTTIXFIPFIWG 888
           +   P                F PFI+G
Sbjct: 183 FKMEPAGSR---GVHAIDDFQFAPFIFG 207


>AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical
           protein F52G3.3 protein.
          Length = 807

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 806 YVFCNFLAMFKYLLKIIRTVATLSSSCKKPILYKQHKN 693
           +VF + +  FK++LKII    ++S +C      K H++
Sbjct: 406 FVFQHSILHFKFILKIIFVFRSISRNCGVQFFQKMHQS 443


>Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical
           protein R01H10.6 protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 454 DKIDRIIDEFPPVEQPQRFGNAAFREWFENVKTNSTQLLQEALQPELHLAIPEIK 618
           D+ID I +    VE   +    AF  +F+   T + +     L PEL LAI  I+
Sbjct: 292 DEIDIIDNNEDDVEIDDKIRPDAFASYFDGEHTATDEKQLPVLNPELGLAIEPIR 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,401,866
Number of Sequences: 27780
Number of extensions: 408783
Number of successful extensions: 1135
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)