Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_H04
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 33 0.36
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 33 0.36
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 32 0.48
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 32 0.48
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 32 0.48
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 32 0.48
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 32 0.48
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 32 0.48
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 32 0.48
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 32 0.48
U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 31 0.83
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 31 0.83
U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protei... 31 0.83
U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protei... 31 0.83
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 31 1.1
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 31 1.1
AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical ... 31 1.1
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 31 1.5
U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine rece... 31 1.5
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 31 1.5
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 30 1.9
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 30 1.9
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 30 1.9
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 3.4
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 3.4
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 3.4
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 3.4
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related p... 29 3.4
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 28 7.8
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical protein
F45H11.4 protein.
Length = 1243
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SPTPCAE---ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIK 483
SP+P + +SD+EL ISVR LN+ K+ G R+ +++ KQ+RRTLKNRGYA +CR +
Sbjct: 1099 SPSPMSSFDHLSDEELAQISVRQLNQ--KLMGQDRNVVMQWKQKRRTLKNRGYALNCRAR 1156
Query: 484 RIEQKDELE 510
R+ + +LE
Sbjct: 1157 RVNNQVQLE 1165
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical protein
F45H11.4 protein.
Length = 1243
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SPTPCAE---ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIK 483
SP+P + +SD+EL ISVR LN+ K+ G R+ +++ KQ+RRTLKNRGYA +CR +
Sbjct: 1099 SPSPMSSFDHLSDEELAQISVRQLNQ--KLMGQDRNVVMQWKQKRRTLKNRGYALNCRAR 1156
Query: 484 RIEQKDELE 510
R+ + +LE
Sbjct: 1157 RVNNQVQLE 1165
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 376 NRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQD 555
+R G+ D + K R+ +NR A CR K++++ ELE + E H + +
Sbjct: 209 SRSASRCGMALDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDA 268
Query: 556 ENNRIREEIEALR 594
E + +E R
Sbjct: 269 ELLELNRALEHFR 281
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 376 NRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQD 555
+R G+ D + K R+ +NR A CR K++++ ELE + E H + +
Sbjct: 229 SRSASRCGMALDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDA 288
Query: 556 ENNRIREEIEALR 594
E + +E R
Sbjct: 289 ELLELNRALEHFR 301
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 32.7 bits (71), Expect = 0.36
Identities = 32/133 (24%), Positives = 62/133 (46%)
Frame = +1
Query: 214 RVTHNQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKM 393
RVT+N IDD I+ P + + +K N C+E +D + +V+D+ + +
Sbjct: 546 RVTYNFSIDDETISEPTPVPQQLEKKTEN--------CSECNDVRMEMNTVKDVLQNV-- 595
Query: 394 RGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIR 573
+ Q+ M+Q + + A+ + K E+ +LE+E+ + +E +
Sbjct: 596 ----QKQLKNMQQNSEQFETKLVASDNKTKNFEK--QLEDERRKNNKHLESSRKTLISKN 649
Query: 574 EEIEALRSXYDAL 612
E++EAL+ AL
Sbjct: 650 EQLEALKRRATAL 662
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 32.7 bits (71), Expect = 0.36
Identities = 32/133 (24%), Positives = 62/133 (46%)
Frame = +1
Query: 214 RVTHNQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKM 393
RVT+N IDD I+ P + + +K N C+E +D + +V+D+ + +
Sbjct: 580 RVTYNFSIDDETISEPTPVPQQLEKKTEN--------CSECNDVRMEMNTVKDVLQNV-- 629
Query: 394 RGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIR 573
+ Q+ M+Q + + A+ + K E+ +LE+E+ + +E +
Sbjct: 630 ----QKQLKNMQQNSEQFETKLVASDNKTKNFEK--QLEDERRKNNKHLESSRKTLISKN 683
Query: 574 EEIEALRSXYDAL 612
E++EAL+ AL
Sbjct: 684 EQLEALKRRATAL 696
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 247 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 298
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 272 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 323
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 255 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 306
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 268 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 319
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 266 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 317
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 406 RDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNR 567
R++ +R+K+ R K R A +KR+E+ N + QE H+ + Q ++R
Sbjct: 332 REEKLRLKEENREKKRREKARIMELKRLEKVYRTSNARIQENHEKSMTQIISHR 385
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 266 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 317
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXY 603
K++ R LKNR A CR K+ E LEN S +++++N + EE++ L+ Y
Sbjct: 247 KRQVRLLKNREAAKECRRKKKEYVKCLENRVS-------VLENQNKALIEELKTLKELY 298
>U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical
protein F53F10.1 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 526 EWHDM-ELMQDENNRIREEIEALRSXYDAL---KRFATMKSIPLPAELD 660
+W + ++DE NR REE E LR YD L KRF + + +E D
Sbjct: 70 DWRNRWSAVRDERNRAREEAETLRLNYDLLLEEKRFLAEQLYHVDSESD 118
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 409 DQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEA 588
D + K R+ +NR A CR K++++ ELE + E H + + E + +E
Sbjct: 76 DDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALEH 135
Query: 589 LR 594
R
Sbjct: 136 FR 137
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 409 DQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEA 588
D + K R+ +NR A CR K++++ ELE + E H + + E + +E
Sbjct: 22 DDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELLELNRALEH 81
Query: 589 LR 594
R
Sbjct: 82 FR 83
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 334 ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELEN 513
+S ++ +S+ +L + LK L+ Q +++ RR KN+ A +CR +R ++ D++ +
Sbjct: 249 VSAFQISEMSLSELQQVLKNESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 308
>U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protein
1, isoform c protein.
Length = 533
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 334 ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELEN 513
+S ++ +S+ +L + LK L+ Q +++ RR KN+ A +CR +R ++ D++ +
Sbjct: 472 VSAFQISEMSLSELQQVLKNESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 531
>U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protein
1, isoform a protein.
Length = 623
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 334 ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELEN 513
+S ++ +S+ +L + LK L+ Q +++ RR KN+ A +CR +R ++ D++ +
Sbjct: 562 VSAFQISEMSLSELQQVLKNESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 621
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 481 KRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAEL 657
+R+ +D LENEKS+ +EL +E ++++++E +S D + PA L
Sbjct: 428 ERVRSQD-LENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEVLSMTLTVPASEPASL 485
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 481 KRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAEL 657
+R+ +D LENEKS+ +EL +E ++++++E +S D + PA L
Sbjct: 428 ERVRSQD-LENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEVLSMTLTVPASEPASL 485
>AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical
protein F17A9.3 protein.
Length = 241
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 406 RDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIE 585
+DQ+ + R KN A R +R ++DE+ + + + L++ E +++R E +
Sbjct: 111 KDQVKDVAYWERRRKNNDAAKRSRDQRRMKEDEMAHRATSLERENMLLRVELDQLRAETD 170
Query: 586 ALRSXYDALKRFATMKSIPLPAE 654
LR+ L T SIP+P +
Sbjct: 171 KLRAL--ILTTPTTSISIPIPLQ 191
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 337 SDDELVSISVRDLNRQL-KMRGLTRDQIVRMKQRRRTLKNRG-YAASCRIKRIEQKDELE 510
S++ L+ V +LN + KM+ +I++ + +T + AA+ RIK +E E
Sbjct: 214 SENALLRQQVIELNSSVEKMKADYESEILKYTKEAKTAGLKAKVAATARIKELETTLEDI 273
Query: 511 NEKSQEWHDMELMQDENNRIREEIEALRS 597
N K +DE +R++EE++ LRS
Sbjct: 274 NGK---------YEDERDRLQEEVDTLRS 293
>U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 32 protein.
Length = 339
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 585 FNLFPYSIIFVLHQFHIVPFLTF--LVLKFIFLFYTLD 478
F LFP S+IF+ QFH++ F +++ + L T+D
Sbjct: 247 FTLFPASLIFLSTQFHVIETTKFGYIIISLLSLSPTID 284
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 376 NRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQE 528
N Q+ M+ + RD +R+R RG S R+ RIE KD++++EK E
Sbjct: 412 NFQITMQNVLRDNDKLDSERKR---ERGSIQS-RLTRIENKDQVKDEKKDE 458
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/130 (20%), Positives = 60/130 (46%)
Frame = +1
Query: 229 QRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLTR 408
+RI++ + + + K L + + L I +++ + ++ RQ + + R
Sbjct: 231 RRIEEERFRLEEEQKRLDEIRRLEEESLRLEEIRRIEEEKK---RIEEIRRQEEEQ--QR 285
Query: 409 DQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEA 588
++ R ++ RR L++ A R + E K + + + QE M++ + R +E EA
Sbjct: 286 IELERREEERR-LESERRAEEERKREEEAKLQEQRRREQEDEHKRRMEEYHRREQERQEA 344
Query: 589 LRSXYDALKR 618
L+ + +KR
Sbjct: 345 LKRREEEIKR 354
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
K RR LKNR A + R K+ E+ ++E+ M + +EN R+R E E LR
Sbjct: 63 KMDRRKLKNRVAAQNARDKKKERSAKIEDV-------MRDLVEENRRLRAENERLR 111
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
K RR LKNR A + R K+ E+ ++E+ M + +EN R+R E E LR
Sbjct: 63 KMDRRKLKNRVAAQNARDKKKERSAKIEDV-------MRDLVEENRRLRAENERLR 111
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
K RR LKNR A + R K+ E+ ++E+ M + +EN R+R E E LR
Sbjct: 63 KMDRRKLKNRVAAQNARDKKKERSAKIEDV-------MRDLVEENRRLRAENERLR 111
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 427 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
K RR LKNR A + R K+ E+ ++E+ M + +EN R+R E E LR
Sbjct: 63 KMDRRKLKNRVAAQNARDKKKERSAKIEDV-------MRDLVEENRRLRAENERLR 111
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 481 KRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
KRIE+ E++K QE +++ ++E RI+EE E R
Sbjct: 508 KRIEEVSIEESKKKQEKLELKQREEEEARIKEEEEKQR 545
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 226 NQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLT 405
N R+ ++ + D+ L K L + S SVR + R++ +T
Sbjct: 523 NHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASIT 582
Query: 406 RD-QIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEI 582
D QI +K++ +L ++ R++++ Q+D+ + S + E+M+D + ++EI
Sbjct: 583 SDRQIQSLKEKVDSLTRELESSRRRMEQL-QEDQTKFLGSHDETKAEMMKD-LHEAQDEI 640
Query: 583 EALRSXYDALK 615
E L + LK
Sbjct: 641 EKLTNQAGQLK 651
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 226 NQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLT 405
N R+ ++ + D+ L K L + S SVR + R++ +T
Sbjct: 523 NHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASIT 582
Query: 406 RD-QIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEI 582
D QI +K++ +L ++ R++++ Q+D+ + S + E+M+D + ++EI
Sbjct: 583 SDRQIQSLKEKVDSLTRELESSRRRMEQL-QEDQTKFLGSHDETKAEMMKD-LHEAQDEI 640
Query: 583 EALRSXYDALK 615
E L + LK
Sbjct: 641 EKLTNQAGQLK 651
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/105 (18%), Positives = 46/105 (43%)
Frame = +1
Query: 346 ELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 525
++ I R+ K +++ +R++ ++R +R+ +++E EK +
Sbjct: 551 DMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREEEE-RREKER 609
Query: 526 EWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAELD 660
+ + ++ + R+E E + + L+R A + AELD
Sbjct: 610 REQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAELD 654
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/105 (18%), Positives = 46/105 (43%)
Frame = +1
Query: 346 ELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 525
++ I R+ K +++ +R++ ++R +R+ +++E EK +
Sbjct: 551 DMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREEEE-RREKER 609
Query: 526 EWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAELD 660
+ + ++ + R+E E + + L+R A + AELD
Sbjct: 610 REQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAELD 654
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/105 (18%), Positives = 46/105 (43%)
Frame = +1
Query: 346 ELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 525
++ I R+ K +++ +R++ ++R +R+ +++E EK +
Sbjct: 551 DMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREEEE-RREKER 609
Query: 526 EWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAELD 660
+ + ++ + R+E E + + L+R A + AELD
Sbjct: 610 REQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAELD 654
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/105 (18%), Positives = 46/105 (43%)
Frame = +1
Query: 346 ELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 525
++ I R+ K +++ +R++ ++R +R+ +++E EK +
Sbjct: 551 DMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREEEE-RREKER 609
Query: 526 EWHDMELMQDENNRIREEIEALRSXYDALKRFATMKSIPLPAELD 660
+ + ++ + R+E E + + L+R A + AELD
Sbjct: 610 REQERRIAAEKERKRRQEEEEEIARLNELQRAAAARQAQRNAELD 654
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/71 (25%), Positives = 42/71 (59%)
Frame = +1
Query: 403 TRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEI 582
T I +K+ +T +N+ ++ +E+K ++EN ++++ +++ M+D+ +EE+
Sbjct: 443 TLQTIEDVKKELKTSQNKENKMRKKVSELEKKLDVENVQNEQ--EVKEMEDDLRGKQEEL 500
Query: 583 EALRSXYDALK 615
LR+ D+LK
Sbjct: 501 NILRN--DSLK 509
>AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related
protein 1 protein.
Length = 455
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 283 GRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGY 462
GR++I+ L+ +S ++ +S+ ++ + LK L QI +++ RR KN+
Sbjct: 384 GRQSID-EQLASDNGLPVSAFQISEMSLSEVKQVLKDESLNEYQIQLIRKIRRRGKNKAA 442
Query: 463 AASCRIKR 486
A +CR +R
Sbjct: 443 ARTCRERR 450
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 439 RTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALR 594
R L+NRG + K E++ E E + +E HD DE + +EE+EA R
Sbjct: 206 RELENRGVLLNEEKKSYEERLEAEAKARKEEHD---RADELAKDKEELEAER 254
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +1
Query: 322 PCAEISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKD 501
P I D+ELV+ R + + R + + K + A + + +E+ D
Sbjct: 72 PAEAIDDEELVNAINRFMRNEYDYDQFMRVTGGQTLKEELGAKQKRSARNNVVDEVEEID 131
Query: 502 ELENEKSQEWHDMELMQD 555
++++ ++ D+ELM+D
Sbjct: 132 TADDDEEEDDEDVELMED 149
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 361 SVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDM 540
SVRD N + R +RD+ MK++ + K S + ++ E+K E + + D
Sbjct: 186 SVRDNNEEGSRRSSSRDKSKDMKEKSQQSKKDSSRKSKKQQKSEKKKSAEQDNRSDPEDD 245
Query: 541 ELMQDENNRIR 573
+ N R R
Sbjct: 246 REAEAPNWRRR 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,353,325
Number of Sequences: 27780
Number of extensions: 314339
Number of successful extensions: 1042
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -