Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H02
         (945 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     117   1e-28
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         100   4e-23
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      36   5e-04
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   5.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   9.3  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  117 bits (282), Expect = 1e-28
 Identities = 51/108 (47%), Positives = 74/108 (68%)
 Frame = +3

Query: 210 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVXLAAEGRLLQAHKLVLSVCSPYFQEM 389
           M   + F L WNN+ +++++ F  L    D VDV LA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 390 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVXVKQEELASFISTAE 533
            K  P +HP++ L+DV+ S L  L++F+Y GEV V Q  L+SF+ TAE
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAE 108


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 99.5 bits (237), Expect = 4e-23
 Identities = 46/105 (43%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
 Frame = +3

Query: 222 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVXLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 401
           + + L WNN+ +NM++ FH LL     VDV LA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 402 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVXVKQEELASFISTAE 533
           P +HP I+  +DV  + L+ +++F+Y+GE+ V Q EL S + TA+
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTAD 113


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 35.9 bits (79), Expect = 5e-04
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 210 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVXLAAE 326
           M   + F L WNN+ +++++ F  L    D VDV LA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 186 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVXL 317
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 FHVESSLSWRRTNNFHY 237
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,238
Number of Sequences: 438
Number of extensions: 4170
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)