Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_H01
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44...    31   1.6  
07_01_1201 - 11419851-11419913,11420090-11420311                       30   2.1  
04_03_0380 - 15150814-15152304                                         29   3.7  
04_03_0348 + 14735581-14737071                                         29   3.7  
01_06_0841 + 32361510-32362178,32362719-32363469,32363671-323638...    29   4.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
01_06_0289 + 28233327-28233815                                         28   8.5  

>10_01_0038 +
           437738-438122,439215-439501,440111-440375,440687-440784
          Length = 344

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 28/88 (31%), Positives = 36/88 (40%)
 Frame = -1

Query: 654 RAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLL 475
           R H+  F G   G    L G +   LS      R GGG     P+TR   G     G + 
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRGGGGDDSALPSTRS-GGKGDSGGSVA 271

Query: 474 TCSFLRYPLILWITVLPPLSELIPLAAA 391
           T S  R  +     + PPLS LI +A +
Sbjct: 272 TASPHRLQMAGNPRLSPPLSPLISIAGS 299


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +3

Query: 540 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAXPDTCP 692
           L PP          Q+WR+  PTG   + +FP G LP A     PA  PD  P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPA--PDRQP 63


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 718 RHASRREKGGQVSGXAAGSEQESARGSFPGGNA 620
           R A   EKG ++   AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 718 RHASRREKGGQVSGXAAGSEQESARGSFPGGNA 620
           R A   EKG ++   AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>01_06_0841 +
           32361510-32362178,32362719-32363469,32363671-32363865,
           32364353-32364612
          Length = 624

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = +3

Query: 651 LSCSDPAAXPDTCPP---FSLRE---AWRFLIAHXVGISXR 755
           +SC+DP    D+CPP   F++ +   AW F I   + +  R
Sbjct: 184 VSCADPMCPHDSCPPAIRFNVEQMYAAWAFKITELISLFQR 224


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 352 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 507
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>01_02_0036 +
           10468636-10468938,10469014-10469109,10469247-10469453,
           10470762-10471097,10471469-10471582,10471634-10471639
          Length = 353

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 721 KRHASRREKGGQVSGXAAGSEQESARGSFPGGNAW 617
           K H  RR +GG         E+E+ R S  GG  W
Sbjct: 9   KHHHHRRRRGGGGEDGGEEEEEETGRLSLRGGGFW 43


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_06_0289 + 28233327-28233815
          Length = 162

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 724 RKRHASRREKGGQVSGXA-AGSEQESARG 641
           R+RHA RR KGG  SG    G  +  ARG
Sbjct: 123 RRRHARRRSKGGGGSGDGDCGGLRGGARG 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,080,223
Number of Sequences: 37544
Number of extensions: 471579
Number of successful extensions: 1390
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)