Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_G17
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0067 + 14620852-14621454 31 1.6
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 31 1.6
11_04_0180 + 14565328-14566226,14566377-14566644 30 2.1
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 30 2.1
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 30 2.1
01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658... 30 2.1
12_01_0634 - 5264012-5264259,5264865-5265085,5265912-5266120,526... 30 2.8
09_04_0583 - 18699265-18699459,18701579-18701827,18703283-187036... 30 2.8
11_04_0024 - 12376642-12377362,12377614-12377849 29 3.7
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 29 3.7
02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476 29 3.7
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 29 4.9
08_02_0122 + 12805419-12805438,12805842-12805989,12806155-128063... 29 4.9
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 29 4.9
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 6.5
05_04_0388 - 20841566-20841667,20841861-20842031 28 8.6
05_04_0382 + 20796567-20796810,20796894-20797750 28 8.6
05_03_0478 - 14526180-14526578 28 8.6
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 28 8.6
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 28 8.6
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081... 28 8.6
>10_08_0067 + 14620852-14621454
Length = 200
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 375 GQRWRRGKRQTFGAADGWAVRRRVN*RDRPEAAEAVDG 488
G R RRGKR++ G+ G RR + RDR A DG
Sbjct: 159 GDRRRRGKRESGGSRRGLDSGRREHHRDRGNAFPTSDG 196
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 355 RGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKS 534
+GY MY G GD+ + RP++R+ ++ T E ++ + R + P L++ + K++
Sbjct: 516 QGYRMYYGG-GDLPTIRPNKRRLASILLKNATMEWNEFETRLCSHPRHSLRTDDTPTKEN 574
>11_04_0180 + 14565328-14566226,14566377-14566644
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 133 QELETIIIVSVFSCAWLVVFVMA--VVLCARVASIRRRVDDMQATGRMRVQKLKMNSDKN 306
Q LE I + C L+ + VV+ ++A I + T ++ LK D +
Sbjct: 176 QWLENIKFSAPVECTSLITRIAKGLVVISDQIAFISAACPCIDETYLVQGHILKHGEDGS 235
Query: 307 HAFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQST 486
+ PG + + L GY +Y + + E + GG + E TR + + +Q S+
Sbjct: 236 LIYFFPGCINEIPLPNAGYHLYNCRELTIPLHTIEESRAGGAYRE--TRNMARNEQGSSS 293
Query: 487 A 489
+
Sbjct: 294 S 294
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 207 HHCHHEHNQPCAAEHAHYYDRFQL 136
HH HH H+ P +H H++ QL
Sbjct: 63 HHHHHHHHPPPRVQHHHHHHHQQL 86
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 252 HVVYSPPDGGDPRAQHHCHHEHNQPCAAEHAHYYDRFQLLNSRS 121
H PP G + Q H H H A+HAH ++ QL ++R+
Sbjct: 32 HAQEQPPGHGHGQVQRHEHPAHG---GAQHAHGGEQLQLAHART 72
>01_06_0356 +
28662956-28664043,28664255-28665139,28665227-28665840,
28665929-28666338
Length = 998
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = -1
Query: 452 LVNSSTNCPPVCRSEGLALSTSPSLPTYMEYPRLDNSSSGT-RPGLWNAWFLSEFIFSF* 276
L ++ T P C G++ +S T +E+ D + GT P + N FLS + S
Sbjct: 47 LASNWTASAPFCSWIGVSCDSSGKWVTGLEFE--DMALEGTISPQIGNLSFLSSLVLSNT 104
Query: 275 TLIRPVACMSSTL-RLMEATLAHSTTAITNTTSHAQLNTLTIMIVSNS 135
TLI PV L RL L++++ + T + L L + ++++
Sbjct: 105 TLIGPVPTELDRLPRLQTLVLSYNSLSGTIPSILGNLTRLESLYLNSN 152
>12_01_0634 -
5264012-5264259,5264865-5265085,5265912-5266120,
5266133-5266677,5266717-5266849,5266957-5267262
Length = 553
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +1
Query: 283 LKMNSDKNHAFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREID 462
LK +D + + PG + L GY +Y + + E + GG + E +
Sbjct: 477 LKYGADGSLIYFFPGCTNEIPLPNTGYRLYNCQELTIPLQTIEESRAGGTYRETSNKARQ 536
Query: 463 QRQQRQSTAP 492
+R++ S+ P
Sbjct: 537 EREESSSSTP 546
>09_04_0583 -
18699265-18699459,18701579-18701827,18703283-18703669,
18703793-18703870,18704082-18704141,18704299-18704343,
18704506-18704718,18704867-18704932
Length = 430
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 279 LNPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAA 169
+ P P G + +V SP G A+ HH H+Q AA
Sbjct: 17 VEPSPKGEISLVLSPAAVGTKMARSPDHHHHHQQQAA 53
>11_04_0024 - 12376642-12377362,12377614-12377849
Length = 318
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +1
Query: 283 LKMNSDKNHAFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREID 462
LK D++ + PG + L GY +Y + + E +TGG + E +
Sbjct: 128 LKHGVDRSLIYFFPGCTNEILLPNAGYHLYNCRELTIPLQTIEESRTGGAYRETRNMTRN 187
Query: 463 QRQQRQSTAPPFLLQS 510
+R+ S+ P L ++
Sbjct: 188 ERESSSSSTPVQLYEA 203
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 120 STWSSGVGNDHNSERVQLRMAGCVRDGSGAVREGRLHQAESRRHAGHRTDEG 275
S G+G H + G D S R+ RL SRR A HR D+G
Sbjct: 53 SEGDGGIGGSHGLHKSGTATTGLPFDISWR-RQDRLQIVVSRRRAAHRLDDG 103
>02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476
Length = 370
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -3
Query: 234 PDGGDPRA--QHHCHHEHNQPCAAEHAHYYDRFQLLNSRSMHELNANLK*LIKLTLFLYH 61
PD PR HH HH A H H++ + Q + EL + L+ FL H
Sbjct: 183 PDLSSPRQLLPHHHHHHPGSSAALYHGHHHQQLQQMYGHCKPELEYHH--LLPQEAFLQH 240
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -3
Query: 273 PHPSGGL---HVVYSPPDGGDPRAQHHCHHEHN--QPCAAEHAH 157
P P GG H+ + PP + QH H H+ QP AA H
Sbjct: 297 PFPGGGKDESHLFHLPPAAAAKQPQHMDEHHHHQQQPMAAPQQH 340
>08_02_0122 +
12805419-12805438,12805842-12805989,12806155-12806380,
12806501-12807117
Length = 336
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/103 (19%), Positives = 43/103 (41%)
Frame = +1
Query: 184 VVFVMAVVLCARVASIRRRVDDMQATGRMRVQKLKMNSDKNHAFHNPGLVPDEELSRRGY 363
++ + A+V ++A ++ + T ++ LK D + + PG + L GY
Sbjct: 115 LIIMFAMVRKIKIAPVKSARPCIDETYLVQGHILKHGVDGSLIYFFPGCTNEIPLPNAGY 174
Query: 364 SMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAP 492
+Y + + E + GG + E ++R+ S+ P
Sbjct: 175 HLYNCHELTISLQTIEEFRVGGAYRETRNMTRNERESSSSSTP 217
>01_06_1127 -
34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 533 AGTSTILPQMDAKAILIPTLFTKKIRMKSLKWKLKLYSIQQYS 661
+GTS LP+ D A + PTL + S WKL+L SI S
Sbjct: 809 SGTSDGLPREDISAKITPTLLK---NLGSPDWKLRLESIDAVS 848
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 225 GDPRAQHHCHHEHNQPCAAEHAHYYDR 145
G P Q H HH+ Q A H Y R
Sbjct: 25 GPPLQQQHNHHQQQQTSAPHHQQYVQR 51
>05_04_0388 - 20841566-20841667,20841861-20842031
Length = 90
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 417 PLRRSGAFHVAIAAHVHGVPSPGQLLIRDQARVVEC 310
PLRRS F ++++ H +P PG L AR C
Sbjct: 13 PLRRSRLFVISLSDHATPLPVPGSWLGATGARGTGC 48
>05_04_0382 + 20796567-20796810,20796894-20797750
Length = 366
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 267 PSGGLHVVYSPPDGGDPRAQHHCHH 193
PS H Y+PP QHH HH
Sbjct: 157 PSTSRHAGYAPPASHHHLLQHHLHH 181
>05_03_0478 - 14526180-14526578
Length = 132
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 180 AGCVRDGSGAVREGRLHQAESRRHAGHRTDEGSKTENEFR*EPR 311
+GCV G R R + + R+H G+R E+ R PR
Sbjct: 46 SGCVSSGGSWARRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPR 89
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 130 VQELETIIIVSVFSCAWLVVFVMAVVLCAR 219
+Q L TI+I+S S L++F+ ++++C R
Sbjct: 738 MQFLGTILIISYVSWPVLIIFIPSILICIR 767
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 381 RWRRGKRQTFGAADGWAVRRRVN*RDRPEAAEAVDGPAFPAAKHRRKQEEEQEPL 545
R G+R+ F GWA+++ + ++ +++ GP A R+ EE P+
Sbjct: 182 RVTHGEREQFERQQGWAIKKMYSSSNKKQSSPG-PGPGDAAVAEIREPAEEYAPV 235
>01_05_0606 -
23607170-23607568,23607738-23607941,23608035-23608113,
23608371-23608430,23608514-23608611,23608703-23608891,
23610670-23611368
Length = 575
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 252 HVVYSPPDGGDPRAQHHCHHEHNQPCAAEHA 160
H V GGD R QHH HH+ + A+ A
Sbjct: 9 HGVRHGGGGGDARKQHHHHHQLSHGFGAKDA 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,633,565
Number of Sequences: 37544
Number of extensions: 546548
Number of successful extensions: 1940
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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